Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05004 and BSU33520

See DNA alignment / Visit BSNT_05004 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence pep-align/BSNT_05004___yvgZ.1.22522.seq
#    -bsequence pep-align/BSU33520___csoR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05004___yvgZ-BSU33520___csoR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05004___yvgZ-BSU33520___csoR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05004___yvgZ
# 2: BSU33520___csoR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 101
# Identity:     101/101 (100.0%)
# Similarity:   101/101 (100.0%)
# Gaps:           0/101 ( 0.0%)
# Score: 518.0
# 
#
#=======================================

BSNT_05004___      1 MEKHNEHKTLNHKSSKEKDQITNRLKRIEGQVRGIQNMVENDRYCVDILV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33520___cs      1 MEKHNEHKTLNHKSSKEKDQITNRLKRIEGQVRGIQNMVENDRYCVDILV     50

BSNT_05004___     51 QISAVQAAMKNVALHLLEDHAHHCVADAIKSGDGEQAISELLDVFKKFTK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33520___cs     51 QISAVQAAMKNVALHLLEDHAHHCVADAIKSGDGEQAISELLDVFKKFTK    100

BSNT_05004___    101 S    101
                     |
BSU33520___cs    101 S    101


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.