Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05004 and BSU33520

See Amino acid alignment / Visit BSNT_05004 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence dna-align/BSNT_05004___yvgZ.1.22522.seq
#    -bsequence dna-align/BSU33520___csoR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05004___yvgZ-BSU33520___csoR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05004___yvgZ-BSU33520___csoR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05004___yvgZ
# 2: BSU33520___csoR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 306
# Identity:     304/306 (99.3%)
# Similarity:   304/306 (99.3%)
# Gaps:           0/306 ( 0.0%)
# Score: 1512.0
# 
#
#=======================================

BSNT_05004___      1 ATGGAAAAGCATAACGAACATAAAACATTAAACCATAAAAGCTCGAAAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33520___cs      1 ATGGAAAAGCATAACGAACATAAAACATTAAACCATAAAAGCTCGAAAGA     50

BSNT_05004___     51 AAAAGATCAGATTACAAACCGGCTTAAGCGGATTGAGGGCCAGGTCAGAG    100
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU33520___cs     51 AAAGGATCAGATTACAAACCGGCTTAAGCGGATTGAGGGCCAGGTCAGAG    100

BSNT_05004___    101 GCATTCAAAACATGGTGGAAAACGACAGATATTGTGTAGATATTCTTGTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33520___cs    101 GCATTCAAAACATGGTGGAAAACGACAGATATTGTGTAGATATTCTTGTG    150

BSNT_05004___    151 CAAATTTCAGCTGTTCAGGCGGCAATGAAAAATGTGGCGCTTCATTTGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33520___cs    151 CAAATTTCAGCTGTTCAGGCGGCAATGAAAAATGTGGCGCTTCATTTGCT    200

BSNT_05004___    201 TGAGGATCATGCCCATCATTGTGTAGCAGATGCCATCAAAAGCGGCGACG    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU33520___cs    201 TGAGGATCATGCCCATCATTGTGTAGCAGATGCCATCAAAAGCGGAGACG    250

BSNT_05004___    251 GGGAACAGGCCATTTCTGAGCTTTTGGACGTATTTAAAAAGTTCACAAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33520___cs    251 GGGAACAGGCCATTTCTGAGCTTTTGGACGTATTTAAAAAGTTCACAAAA    300

BSNT_05004___    301 TCATAA    306
                     ||||||
BSU33520___cs    301 TCATAA    306


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