Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04957 and BSU33250

See DNA alignment / Visit BSNT_04957 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:28
# Commandline: needle
#    -asequence pep-align/BSNT_04957___yvrL.1.22522.seq
#    -bsequence pep-align/BSU33250___yvrL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04957___yvrL-BSU33250___yvrL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04957___yvrL-BSU33250___yvrL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04957___yvrL
# 2: BSU33250___yvrL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 136
# Identity:     110/136 (80.9%)
# Similarity:   111/136 (81.6%)
# Gaps:          25/136 (18.4%)
# Score: 557.0
# 
#
#=======================================

BSNT_04957___      1 -------------------------MTYFAVIYILFSLAGTSYRSAAHVL     25
                                              :||||||||||||||||||||||||
BSU33250___yv      1 MKHQNPSKRLLRLSIKYLLAAAAVVLTYFAVIYILFSLAGTSYRSAAHVL     50

BSNT_04957___     26 LFAVVFLVLGLCFEPFERLMIHSFTFFKTGKRLFILLAGIVQLLFLWMTA     75
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33250___yv     51 LFAVVFLVLGLCFEPFERLMIHSFTFFKTGKRLFILLAGIVQLLFLWMTA    100

BSNT_04957___     76 HTTDQLISDIWLSTTEEMIVAAVFLILDKCNSALPS    111
                     ||||||||||||||||||||||||||||||||||||
BSU33250___yv    101 HTTDQLISDIWLSTTEEMIVAAVFLILDKCNSALPS    136


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