Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04957 and BSU33250

See Amino acid alignment / Visit BSNT_04957 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:28
# Commandline: needle
#    -asequence dna-align/BSNT_04957___yvrL.1.22522.seq
#    -bsequence dna-align/BSU33250___yvrL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04957___yvrL-BSU33250___yvrL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04957___yvrL-BSU33250___yvrL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04957___yvrL
# 2: BSU33250___yvrL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity:     332/411 (80.8%)
# Similarity:   332/411 (80.8%)
# Gaps:          75/411 (18.2%)
# Score: 1644.0
# 
#
#=======================================

BSNT_04957___      0 --------------------------------------------------      0
                                                                       
BSU33250___yv      1 GTGAAACATCAAAACCCTTCAAAACGCTTATTGCGGCTCTCCATAAAGTA     50

BSNT_04957___      1 -------------------------TTGACCTATTTTGCTGTCATCTATA     25
                                              |||||||||||||||||||||||||
BSU33250___yv     51 CTTGCTGGCCGCAGCAGCAGTGGTGTTGACCTATTTTGCTGTCATCTATA    100

BSNT_04957___     26 TATTGTTTTCTTTAGCGGGAACGAGCTACCGCTCAGCAGCTCATGTCCTG     75
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33250___yv    101 TATTGTTTTCTTTAGCGGGAACGAGCTACCGCTCAGCAGCTCATGTCCTG    150

BSNT_04957___     76 CTTTTTGCCGTGGTATTTCTTGTTCTCGGATTATGCTTTGAACCATTTGA    125
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU33250___yv    151 CTTTTTGCCGTGGTATTCCTTGTTCTCGGATTATGCTTTGAACCATTTGA    200

BSNT_04957___    126 AAGGCTGATGATACATAGTTTTACATTTTTCAAGACAGGAAAACGTCTAT    175
                     |.||||||||||||||||.|||||||||||||||||||||||||||||||
BSU33250___yv    201 ACGGCTGATGATACATAGCTTTACATTTTTCAAGACAGGAAAACGTCTAT    250

BSNT_04957___    176 TCATTCTCCTTGCCGGCATCGTACAGCTGCTGTTTTTGTGGATGACTGCT    225
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU33250___yv    251 TCATTCTCCTTGCTGGCATCGTACAGCTGCTGTTTTTGTGGATGACTGCT    300

BSNT_04957___    226 CATACAACAGACCAATTGATCAGCGACATCTGGCTGTCCACCACAGAAGA    275
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33250___yv    301 CATACAACAGACCAATTGATCAGCGACATCTGGCTGTCCACCACAGAAGA    350

BSNT_04957___    276 AATGATTGTCGCAGCCGTTTTTTTGATTTTAGACAAATGCAACTCGGCTC    325
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33250___yv    351 AATGATTGTCGCAGCCGTTTTTTTGATTTTAGACAAATGCAACTCGGCTC    400

BSNT_04957___    326 TTCCCAGCTAA    336
                     |||||||||||
BSU33250___yv    401 TTCCCAGCTAA    411


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