Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04954 and BSU33239

See DNA alignment / Visit BSNT_04954 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:28
# Commandline: needle
#    -asequence pep-align/BSNT_04954.1.22522.seq
#    -bsequence pep-align/BSU33239___yvrJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04954-BSU33239___yvrJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04954-BSU33239___yvrJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04954
# 2: BSU33239___yvrJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 112
# Identity:      50/112 (44.6%)
# Similarity:    50/112 (44.6%)
# Gaps:          62/112 (55.4%)
# Score: 250.0
# 
#
#=======================================

BSNT_04954         0 --------------------------------------------------      0
                                                                       
BSU33239___yv      1 MTVKDFDSPSNRLPTKLNEGKQKKVNYYFPPSVFQNTLQQFTFYRFSSLT     50

BSNT_04954         1 ------------MDQVFIEEVVKQIGNLGFPALIAMYLLTRFEKKFDQLI     38
                                 ||||||||||||||||||||||||||||||||||||||
BSU33239___yv     51 YMTAEKEGRYFPMDQVFIEEVVKQIGNLGFPALIAMYLLTRFEKKFDQLI    100

BSNT_04954        39 ELMTELKDHAKK     50
                     ||||||||||||
BSU33239___yv    101 ELMTELKDHAKK    112


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