Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04954 and BSU33239
See
Amino acid alignment /
Visit
BSNT_04954 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence dna-align/BSNT_04954.1.22522.seq
# -bsequence dna-align/BSU33239___yvrJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04954-BSU33239___yvrJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04954-BSU33239___yvrJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04954
# 2: BSU33239___yvrJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity: 153/339 (45.1%)
# Similarity: 153/339 (45.1%)
# Gaps: 186/339 (54.9%)
# Score: 765.0
#
#
#=======================================
BSNT_04954 0 -------------------------------------------------- 0
BSU33239___yv 1 TTGACCGTAAAAGACTTTGATAGTCCATCAAACCGCCTCCCTACTAAATT 50
BSNT_04954 0 -------------------------------------------------- 0
BSU33239___yv 51 AAATGAAGGAAAGCAAAAAAAAGTAAACTACTACTTTCCGCCTAGTGTCT 100
BSNT_04954 0 -------------------------------------------------- 0
BSU33239___yv 101 TCCAAAATACTTTGCAGCAGTTTACGTTTTATCGGTTTTCCTCACTTACA 150
BSNT_04954 1 ------------------------------------ATGGATCAGGTTTT 14
||||||||||||||
BSU33239___yv 151 TACATGACTGCAGAAAAAGAAGGGAGGTATTTTCCTATGGATCAGGTTTT 200
BSNT_04954 15 TATAGAGGAAGTCGTAAAACAGATCGGCAATTTGGGGTTTCCCGCGCTGA 64
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33239___yv 201 TATAGAGGAAGTCGTAAAACAGATCGGCAATTTGGGGTTTCCCGCGCTGA 250
BSNT_04954 65 TTGCAATGTATCTGCTGACCCGATTCGAAAAGAAGTTTGATCAACTAATA 114
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33239___yv 251 TTGCAATGTATCTGCTGACCCGATTCGAAAAGAAGTTTGATCAACTAATA 300
BSNT_04954 115 GAACTAATGACAGAACTGAAAGATCATGCAAAAAAATAA 153
|||||||||||||||||||||||||||||||||||||||
BSU33239___yv 301 GAACTAATGACAGAACTGAAAGATCATGCAAAAAAATAA 339
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.