Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04952 and BSU33230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence pep-align/BSNT_04952___yvrI.1.22522.seq
# -bsequence pep-align/BSU33230___sigO.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04952___yvrI-BSU33230___sigO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04952___yvrI-BSU33230___sigO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04952___yvrI
# 2: BSU33230___sigO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 171/212 (80.7%)
# Similarity: 174/212 (82.1%)
# Gaps: 36/212 (17.0%)
# Score: 885.0
#
#
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BSNT_04952___ 1 MDYQSLLRSKCKEIMKHPIVKHFLSNPQHYRLFKNVMESPNEKDAKSLDE 50
|||||||||||||||||||||||||||||||:||||
BSU33230___si 1 --------------MKHPIVKHFLSNPQHYRLFKNVMESPNEKDARSLDE 36
BSNT_04952___ 51 LFKQFYKEIRIVKYMNSMIRIFSIDFDKRVRKNQKRYPLTVDHPEAGDRL 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33230___si 37 LFKQFYKEIRIVKYMNSMIRIFSIDFDKRVRKNQKRYPLTVDHPEAGDRL 86
BSNT_04952___ 101 PSETGSDAFEEFLDRQDDLSQHVQDYQLYQAIQKLTDKQKSVLTKVYLHG 150
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU33230___si 87 SSETGSDAFEEFLDRQDDLSQHVQDYQLYQAIQKLTDKQKSVLTKVYLHG 136
BSNT_04952___ 151 ATMQEIADSLGESRQNISNIHKKGLENIRKQLAAQKRGKSKLWTASLNKK 200
||||||||||||||||||||||||||||||||||||:|:.
BSU33230___si 137 ATMQEIADSLGESRQNISNIHKKGLENIRKQLAAQKKGEK---------- 176
BSNT_04952___ 201 RNKKTRLMTLSI 212
BSU33230___si 176 ------------ 176
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