Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04952 and BSU33230
See
Amino acid alignment /
Visit
BSNT_04952 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence dna-align/BSNT_04952___yvrI.1.22522.seq
# -bsequence dna-align/BSU33230___sigO.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04952___yvrI-BSU33230___sigO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04952___yvrI-BSU33230___sigO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04952___yvrI
# 2: BSU33230___sigO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 640
# Identity: 524/640 (81.9%)
# Similarity: 524/640 (81.9%)
# Gaps: 110/640 (17.2%)
# Score: 2586.0
#
#
#=======================================
BSNT_04952___ 1 ATGGACTATCAAAGTCTTTTACGGTCAAAATGTAAGGAGATAATGAAGCA 50
||||||||
BSU33230___si 1 ------------------------------------------ATGAAGCA 8
BSNT_04952___ 51 TCCCATCGTGAAGCATTTTTTGAGCAATCCTCAGCATTACCGTTTGTTCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33230___si 9 TCCCATCGTGAAGCATTTTTTGAGCAATCCTCAGCATTACCGTTTGTTCA 58
BSNT_04952___ 101 AAAACGTAATGGAAAGCCCTAACGAAAAAGATGCAAAATCATTGGACGAG 150
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU33230___si 59 AAAACGTAATGGAAAGCCCTAACGAAAAAGATGCAAGATCATTGGACGAG 108
BSNT_04952___ 151 CTATTTAAGCAGTTTTATAAAGAAATCCGCATCGTCAAGTATATGAATTC 200
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU33230___si 109 CTATTTAAGCAATTTTATAAAGAAATCCGCATCGTCAAGTATATGAATTC 158
BSNT_04952___ 201 AATGATTCGCATCTTTTCTATTGATTTTGATAAGCGGGTTCGCAAAAACC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33230___si 159 AATGATTCGCATCTTTTCTATTGATTTTGATAAGCGGGTTCGCAAAAACC 208
BSNT_04952___ 251 AAAAACGGTATCCGCTGACGGTTGATCATCCGGAGGCGGGAGATCGGCTT 300
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU33230___si 209 AAAAACGGTATCCACTGACGGTTGATCATCCGGAGGCGGGAGATCGGCTT 258
BSNT_04952___ 301 CCTTCCGAAACAGGTAGCGATGCATTTGAAGAATTTTTAGACAGGCAGGA 350
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU33230___si 259 TCTTCCGAAACAGGTAGCGATGCATTTGAAGAATTTTTAGACAGGCAGGA 308
BSNT_04952___ 351 TGATTTGAGCCAGCATGTACAGGATTACCAGCTCTACCAAGCGATCCAGA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33230___si 309 TGATTTGAGCCAGCATGTACAGGATTACCAGCTCTACCAAGCGATCCAGA 358
BSNT_04952___ 401 AGCTGACTGACAAACAAAAAAGTGTGCTGACGAAAGTCTATCTTCACGGT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33230___si 359 AGCTGACTGACAAACAAAAAAGTGTGCTGACGAAAGTCTATCTTCACGGT 408
BSNT_04952___ 451 GCCACGATGCAGGAGATTGCAGATTCATTAGGGGAGTCCCGACAAAACAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33230___si 409 GCCACGATGCAGGAGATTGCAGATTCATTAGGGGAGTCCCGACAAAACAT 458
BSNT_04952___ 501 TTCCAACATTCATAAAAAGGGGCTGGAGAATATCAGAAAGCAGCTAGCGG 550
.||||||||||||||||||||||||||||||||||||||||||.||||||
BSU33230___si 459 CTCCAACATTCATAAAAAGGGGCTGGAGAATATCAGAAAGCAGTTAGCGG 508
BSNT_04952___ 551 CGC-AAAAAAGGGGGAAAAGTAAGCTGTGGACGGCCAGTTTGAACAAAAA 599
||| |||||||||||||||||||
BSU33230___si 509 CGCAAAAAAAGGGGGAAAAGTAA--------------------------- 531
BSNT_04952___ 600 AAGAAACAAAAAGACGAGACTTATGACATTGAGCATCTGA 639
BSU33230___si 531 ---------------------------------------- 531
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.