Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04943 and BSU33190

See DNA alignment / Visit BSNT_04943 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence pep-align/BSNT_04943___yvrD.1.22522.seq
#    -bsequence pep-align/BSU33190___yvrD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04943___yvrD-BSU33190___yvrD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04943___yvrD-BSU33190___yvrD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04943___yvrD
# 2: BSU33190___yvrD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     260/263 (98.9%)
# Similarity:   263/263 (100.0%)
# Gaps:           0/263 ( 0.0%)
# Score: 1297.0
# 
#
#=======================================

BSNT_04943___      1 MDLQLKDKLVLITGSTSGIGKAAAKSFLQEGAAVIVNGRKQETVNRTIEE     50
                     ||||||:|||||||||||||||||||||||||||||||||||||:|||||
BSU33190___yv      1 MDLQLKEKLVLITGSTSGIGKAAAKSFLQEGAAVIVNGRKQETVDRTIEE     50

BSNT_04943___     51 LSGYGTVHGAAADLSKTDEAAAFIEKVNEIGDIDILVNNLGFFEVKDFAD    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33190___yv     51 LSGYGTVHGAAADLSKTDEAAAFIEKVNEIGDIDILVNNLGFFEVKDFAD    100

BSNT_04943___    101 VTDEEWNQYFEVNVMSAVRTSRHFLPKMLAKNSGRILNIASEAGVKPLPT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33190___yv    101 VTDEEWNQYFEVNVMSAVRTSRHFLPKMLAKNSGRILNIASEAGVKPLPT    150

BSNT_04943___    151 MIPYSMTKTALISLSRGMAEMTKGTNVTVNSVLPGPTWTEGVASYMEGAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33190___yv    151 MIPYSMTKTALISLSRGMAEMTKGTNVTVNSVLPGPTWTEGVASYMEGAA    200

BSNT_04943___    201 KAAGQDTDTFIKDYFKVNEPTSLIQRYATAEEVANTIVFLASDAASAING    250
                     :|||||||||||||||||||||||||||||||||||||||||||||||||
BSU33190___yv    201 QAAGQDTDTFIKDYFKVNEPTSLIQRYATAEEVANTIVFLASDAASAING    250

BSNT_04943___    251 TAQRVEGGIIRSL    263
                     |||||||||||||
BSU33190___yv    251 TAQRVEGGIIRSL    263


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