Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04943 and BSU33190

See Amino acid alignment / Visit BSNT_04943 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence dna-align/BSNT_04943___yvrD.1.22522.seq
#    -bsequence dna-align/BSU33190___yvrD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04943___yvrD-BSU33190___yvrD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04943___yvrD-BSU33190___yvrD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04943___yvrD
# 2: BSU33190___yvrD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 792
# Identity:     778/792 (98.2%)
# Similarity:   778/792 (98.2%)
# Gaps:           0/792 ( 0.0%)
# Score: 3834.0
# 
#
#=======================================

BSNT_04943___      1 ATGGATTTACAGCTAAAAGACAAACTCGTCTTAATCACCGGCTCGACGTC     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU33190___yv      1 ATGGATTTACAGCTAAAAGAAAAACTCGTCTTAATCACCGGCTCGACGTC     50

BSNT_04943___     51 CGGTATCGGGAAAGCCGCCGCAAAAAGCTTTCTGCAAGAGGGTGCGGCAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33190___yv     51 CGGTATCGGGAAAGCCGCCGCAAAAAGCTTTCTGCAAGAGGGTGCGGCAG    100

BSNT_04943___    101 TCATTGTCAACGGACGCAAACAGGAGACTGTTAATCGCACGATTGAAGAG    150
                     |||||||||||||||||||||||||||||||..|||||||.|||||||||
BSU33190___yv    101 TCATTGTCAACGGACGCAAACAGGAGACTGTCGATCGCACCATTGAAGAG    150

BSNT_04943___    151 CTTTCTGGATATGGAACGGTGCACGGTGCTGCTGCCGATTTGTCAAAAAC    200
                     ||||||||.||||||||.||||||||||||||||||||||||||||||||
BSU33190___yv    151 CTTTCTGGCTATGGAACAGTGCACGGTGCTGCTGCCGATTTGTCAAAAAC    200

BSNT_04943___    201 AGATGAAGCAGCGGCTTTTATTGAAAAAGTAAATGAAATCGGTGATATTG    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||.|
BSU33190___yv    201 AGATGAAGCAGCGGCTTTTATCGAAAAAGTAAATGAAATCGGTGATATCG    250

BSNT_04943___    251 ATATCCTTGTCAACAACCTTGGTTTCTTCGAGGTAAAAGACTTTGCCGAT    300
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU33190___yv    251 ATATCCTTGTCAACAACCTTGGTTTCTTCGAGGTAAAAGACTTCGCCGAT    300

BSNT_04943___    301 GTGACAGATGAAGAGTGGAATCAATATTTCGAAGTGAACGTGATGAGCGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33190___yv    301 GTGACAGATGAAGAGTGGAATCAATATTTCGAAGTGAACGTGATGAGCGC    350

BSNT_04943___    351 CGTTCGGACAAGCCGTCACTTCCTTCCAAAAATGCTTGCCAAAAACAGCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33190___yv    351 CGTTCGGACAAGCCGTCACTTCCTTCCAAAAATGCTTGCCAAAAACAGCG    400

BSNT_04943___    401 GCCGCATTTTAAATATTGCAAGTGAAGCAGGCGTCAAACCGCTGCCAACG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33190___yv    401 GCCGCATTTTAAATATTGCAAGTGAAGCAGGCGTCAAACCGCTGCCAACG    450

BSNT_04943___    451 ATGATTCCATACTCAATGACAAAAACGGCGCTGATCAGCCTTTCAAGAGG    500
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU33190___yv    451 ATGATTCCATACTCAATGACAAAAACGGCACTGATCAGCCTTTCAAGAGG    500

BSNT_04943___    501 AATGGCTGAAATGACAAAAGGCACAAATGTGACGGTTAACTCAGTGCTCC    550
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU33190___yv    501 AATGGCTGAAATGACAAAAGGCACAAATGTGACGGTCAACTCAGTGCTCC    550

BSNT_04943___    551 CGGGACCTACTTGGACAGAGGGCGTGGCATCCTATATGGAAGGCGCCGCA    600
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU33190___yv    551 CGGGACCTACTTGGACAGAGGGCGTGGCCTCCTATATGGAAGGCGCCGCA    600

BSNT_04943___    601 AAAGCAGCCGGCCAGGATACAGATACATTTATCAAAGACTATTTCAAGGT    650
                     .||||||||||.||||||||||||||||||||||||||||||||||||||
BSU33190___yv    601 CAAGCAGCCGGACAGGATACAGATACATTTATCAAAGACTATTTCAAGGT    650

BSNT_04943___    651 CAATGAGCCAACCTCACTTATTCAGCGATACGCGACAGCAGAAGAAGTCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33190___yv    651 CAATGAGCCAACCTCACTTATTCAGCGATACGCGACAGCAGAAGAAGTCG    700

BSNT_04943___    701 CCAACACAATCGTATTCCTCGCGTCTGACGCCGCATCCGCCATTAACGGC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33190___yv    701 CCAACACAATCGTATTCCTCGCGTCTGACGCCGCATCCGCCATTAACGGC    750

BSNT_04943___    751 ACGGCACAGCGTGTGGAAGGCGGCATTATCCGTTCTCTGTAG    792
                     ||||||||||||||||||||||||||||||||||||||||||
BSU33190___yv    751 ACGGCACAGCGTGTGGAAGGCGGCATTATCCGTTCTCTGTAG    792


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