Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04887 and BSU32940

See DNA alignment / Visit BSNT_04887 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:23
# Commandline: needle
#    -asequence pep-align/BSNT_04887___yusV.1.22522.seq
#    -bsequence pep-align/BSU32940___yusV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04887___yusV-BSU32940___yusV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04887___yusV-BSU32940___yusV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04887___yusV
# 2: BSU32940___yusV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 295
# Identity:     274/295 (92.9%)
# Similarity:   274/295 (92.9%)
# Gaps:          20/295 ( 6.8%)
# Score: 1410.0
# 
#
#=======================================

BSNT_04887___      1 MYIENVQYIVLLKSQQKGAVMGMSAISTETLSLGYGDAVIIDELNLTIPK     50
                                         ||||||||||||||||||||||||||||||
BSU32940___yu      1 --------------------MGMSAISTETLSLGYGDAVIIDELNLTIPK     30

BSNT_04887___     51 GEITVFIGSNGCGKSTLLRSLARLMKPRGGSVLLEGRAIAKLPTKEVAKE    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu     31 GEITVFIGSNGCGKSTLLRSLARLMKPRGGSVLLEGRAIAKLPTKEVAKE     80

BSNT_04887___    101 LAILPQGPSAPEGLTVHQLVKQGRYPYQNWLKQWSKEDEEAVERALKATK    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu     81 LAILPQGPSAPEGLTVHQLVKQGRYPYQNWLKQWSKEDEEAVERALKATK    130

BSNT_04887___    151 LEDMADRAVDSLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEI    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu    131 LEDMADRAVDSLSGGQRQRAWIAMTLAQETDIILLDEPTTYLDMTHQIEI    180

BSNT_04887___    201 LDLLFELNEKEGRTIVMVLHDLNLACRYAHHLVAIKDKRIYAEGRPEEVI    250
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU32940___yu    181 LDLLFELNEKEDRTIVMVLHDLNLACRYAHHLVAIKDKRIYAEGRPEEVI    230

BSNT_04887___    251 TCDLVQNVFSMNCQVTQDPLFGTPLCIPHGRGRCIVQEAAFTSHG    295
                     |||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu    231 TCDLVQNVFSMNCQVTQDPLFGTPLCIPHGRGRCIVQEAAFTSHG    275


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.