Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04887 and BSU32940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:23
# Commandline: needle
# -asequence dna-align/BSNT_04887___yusV.1.22522.seq
# -bsequence dna-align/BSU32940___yusV.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04887___yusV-BSU32940___yusV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04887___yusV-BSU32940___yusV.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04887___yusV
# 2: BSU32940___yusV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 888
# Identity: 819/888 (92.2%)
# Similarity: 819/888 (92.2%)
# Gaps: 60/888 ( 6.8%)
# Score: 4059.0
#
#
#=======================================
BSNT_04887___ 1 ATGTATATAGAAAACGTGCAATACATAGTGCTGCTAAAAAGCCAGCAAAA 50
BSU32940___yu 0 -------------------------------------------------- 0
BSNT_04887___ 51 AGGAGCGGTTATGGGTATGAGTGCAATTTCTACAGAAACGCTGAGCTTAG 100
||||||||||||||||||||||||||||||||||||||||
BSU32940___yu 1 ----------ATGGGTATGAGTGCAATTTCTACAGAAACGCTGAGCTTAG 40
BSNT_04887___ 101 GATACGGGGATGCCGTTATTATTGATGAGTTGAATTTAACAATTCCCAAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu 41 GATACGGGGATGCCGTTATTATTGATGAGTTGAATTTAACAATTCCCAAA 90
BSNT_04887___ 151 GGTGAAATTACCGTATTTATTGGCAGCAATGGCTGCGGAAAATCGACACT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu 91 GGTGAAATTACCGTATTTATTGGCAGCAATGGCTGCGGAAAATCGACACT 140
BSNT_04887___ 201 TTTACGTTCATTAGCGCGCCTGATGAAGCCGAGAGGCGGTTCAGTGCTGC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu 141 TTTACGTTCATTAGCGCGCCTGATGAAGCCGAGAGGCGGTTCAGTGCTGC 190
BSNT_04887___ 251 TGGAAGGAAGAGCGATTGCCAAGCTTCCGACGAAGGAAGTCGCAAAAGAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu 191 TGGAAGGAAGAGCGATTGCCAAGCTTCCGACGAAGGAAGTCGCAAAAGAG 240
BSNT_04887___ 301 CTCGCAATCCTGCCCCAAGGTCCTTCGGCTCCTGAGGGGCTGACGGTGCA 350
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU32940___yu 241 CTCGCAATCCTGCCCCAAGGTCCTTCGGCTCCAGAGGGGCTGACGGTGCA 290
BSNT_04887___ 351 TCAGCTGGTGAAGCAAGGAAGATATCCTTACCAAAACTGGCTGAAGCAGT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu 291 TCAGCTGGTGAAGCAAGGAAGATATCCTTACCAAAACTGGCTGAAGCAGT 340
BSNT_04887___ 401 GGTCAAAAGAGGATGAGGAAGCAGTTGAAAGAGCGCTTAAAGCAACAAAG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu 341 GGTCAAAAGAGGATGAGGAAGCAGTTGAAAGAGCGCTTAAAGCAACAAAG 390
BSNT_04887___ 451 CTTGAGGACATGGCTGACCGCGCCGTTGATTCTTTGTCAGGCGGACAGCG 500
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU32940___yu 391 CTTGAGGACATGGCTGACCGTGCCGTTGATTCTTTGTCAGGCGGACAGCG 440
BSNT_04887___ 501 CCAGCGGGCTTGGATTGCGATGACGCTTGCCCAGGAAACGGATATCATCC 550
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU32940___yu 441 CCAGCGGGCTTGGATCGCGATGACGCTTGCCCAGGAAACGGATATCATCC 490
BSNT_04887___ 551 TTCTTGACGAGCCGACGACGTATTTAGACATGACGCATCAAATTGAAATT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu 491 TTCTTGACGAGCCGACGACGTATTTAGACATGACGCATCAAATTGAAATT 540
BSNT_04887___ 601 CTTGATTTGCTGTTTGAGCTGAATGAAAAGGAAGGCCGGACGATTGTTAT 650
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU32940___yu 541 CTTGATTTGCTGTTTGAGCTGAATGAAAAGGAAGACCGGACGATTGTTAT 590
BSNT_04887___ 651 GGTACTCCATGACTTAAACTTGGCGTGCCGCTATGCACACCATCTCGTGG 700
|||.||||||||||||||||||||||||||||||||.||.|||||.||||
BSU32940___yu 591 GGTTCTCCATGACTTAAACTTGGCGTGCCGCTATGCGCATCATCTTGTGG 640
BSNT_04887___ 701 CCATAAAAGACAAACGGATTTATGCAGAAGGCCGTCCGGAAGAGGTCATC 750
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU32940___yu 641 CCATAAAAGATAAACGGATTTATGCAGAAGGCCGTCCGGAAGAGGTCATC 690
BSNT_04887___ 751 ACTTGTGATCTTGTGCAAAATGTGTTTTCTATGAACTGTCAGGTTACACA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu 691 ACTTGTGATCTTGTGCAAAATGTGTTTTCTATGAACTGTCAGGTTACACA 740
BSNT_04887___ 801 GGACCCGCTCTTCGGAACGCCTCTTTGCATTCCTCATGGCAGGGGCAGAT 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32940___yu 741 GGACCCGCTCTTCGGAACGCCTCTTTGCATTCCTCATGGCAGGGGCAGAT 790
BSNT_04887___ 851 GCATTGTCCAGGAAGCGGCTTTCACATCACATGGATAA 888
||||||||||||||||||||||||||||||||||||||
BSU32940___yu 791 GCATTGTCCAGGAAGCGGCTTTCACATCACATGGATAA 828
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