Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04767 and BSU32210

See DNA alignment / Visit BSNT_04767 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence pep-align/BSNT_04767___yuzD.1.22522.seq
#    -bsequence pep-align/BSU32210___yuzD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04767___yuzD-BSU32210___yuzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04767___yuzD-BSU32210___yuzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04767___yuzD
# 2: BSU32210___yuzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:     105/108 (97.2%)
# Similarity:   106/108 (98.1%)
# Gaps:           1/108 ( 0.9%)
# Score: 569.0
# 
#
#=======================================

BSNT_04767___      1 -MKPVMLSVYGAETVCASCVNMPTAKDTYEWLEAALKRKYPNQPFEMQYI     49
                      ||||||||||||.||||||||||||||||||||||||||||||||||||
BSU32210___yu      1 MMKPVMLSVYGAENVCASCVNMPTAKDTYEWLEAALKRKYPNQPFEMQYI     50

BSNT_04767___     50 DIYEPPDNEHAKELAEKIRNDEYFYPLVLVEDKIVGEGNPKLKDVYEEME     99
                     ||:|||||||||||||||||||||||||||||||||||||||||||||||
BSU32210___yu     51 DIHEPPDNEHAKELAEKIRNDEYFYPLVLVEDKIVGEGNPKLKDVYEEME    100

BSNT_04767___    100 KHGYTENR    107
                     ||||||||
BSU32210___yu    101 KHGYTENR    108


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.