Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_04767 and BSU32210

See Amino acid alignment / Visit BSNT_04767 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence dna-align/BSNT_04767___yuzD.1.22522.seq
#    -bsequence dna-align/BSU32210___yuzD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04767___yuzD-BSU32210___yuzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04767___yuzD-BSU32210___yuzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04767___yuzD
# 2: BSU32210___yuzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity:     317/327 (96.9%)
# Similarity:   317/327 (96.9%)
# Gaps:           3/327 ( 0.9%)
# Score: 1557.0
# 
#
#=======================================

BSNT_04767___      1 ---ATGAAACCAGTCATGCTAAGCGTATACGGGGCAGAAACCGTGTGTGC     47
                        |||||||||||||||||||||||.|||||||||||||.|||.|||||
BSU32210___yu      1 GTGATGAAACCAGTCATGCTAAGCGTGTACGGGGCAGAAAACGTTTGTGC     50

BSNT_04767___     48 GAGCTGTGTCAATATGCCGACAGCCAAGGATACATACGAGTGGCTTGAGG     97
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU32210___yu     51 GAGCTGTGTAAATATGCCGACAGCCAAGGATACATACGAGTGGCTTGAGG    100

BSNT_04767___     98 CTGCGCTGAAAAGAAAATATCCAAATCAGCCTTTTGAAATGCAGTACATC    147
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU32210___yu    101 CTGCGCTGAAAAGAAAATATCCAAATCAGCCTTTTGAGATGCAGTACATC    150

BSNT_04767___    148 GATATTTATGAGCCGCCTGACAATGAACATGCGAAAGAGCTTGCGGAAAA    197
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU32210___yu    151 GATATTCATGAGCCGCCTGACAATGAACATGCGAAAGAGCTTGCGGAAAA    200

BSNT_04767___    198 AATCAGAAATGACGAGTATTTTTATCCGCTTGTGCTCGTAGAAGACAAAA    247
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU32210___yu    201 AATCAGAAATGACGAGTATTTTTATCCGCTTGTGCTTGTAGAAGACAAAA    250

BSNT_04767___    248 TTGTCGGTGAAGGCAATCCAAAATTAAAAGACGTTTATGAGGAAATGGAG    297
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU32210___yu    251 TTGTCGGTGAAGGCAATCCAAAATTAAAAGACGTTTATGAGGAAATGGAG    300

BSNT_04767___    298 AAGCATGGGTATACAGAAAACCGCTGA    324
                     |||||||||||||||||||||||||||
BSU32210___yu    301 AAGCATGGGTATACAGAAAACCGCTGA    327


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.