Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04408 and BSU30280
See
DNA alignment /
Visit
BSNT_04408 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence pep-align/BSNT_04408___amyD.1.22522.seq
# -bsequence pep-align/BSU30280___amyD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04408___amyD-BSU30280___amyD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04408___amyD-BSU30280___amyD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04408___amyD
# 2: BSU30280___amyD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity: 285/303 (94.1%)
# Similarity: 286/303 (94.4%)
# Gaps: 16/303 ( 5.3%)
# Score: 1453.5
#
#
#=======================================
BSNT_04408___ 1 MSEIARDVHVKQVKPKKQSSLWWMYIPALLSVLVFMIYPFVKGTLITFTN 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30280___am 1 MSEIARDVHVKQVKPKKQSSLWWMYIPALLSVLVFMIYPFVKGTLITFTN 50
BSNT_04408___ 51 WNGFSQVYQWVGFAQYERLFSDPDTWHILKNTLLYGLGSTFFQNVVGLLY 100
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU30280___am 51 WNGFSQVYQWVGFAQYERLFSDPDTWHILKNTLHYGLGSTFFQNVVGLLY 100
BSNT_04408___ 101 ALLLNQSIKTKAVTRTIVYLPVMISPLIMGYIWYFFFSYDGGALNDLLGV 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30280___am 101 ALLLNQSIKTKAVTRTIVYLPVMISPLIMGYIWYFFFSYDGGALNDLLGV 150
BSNT_04408___ 151 FGISPINALASPS----------------IAMVVYLAGLQSIPKDYYEAA 184
||||||||||||| |||||||||||||||||||||
BSU30280___am 151 FGISPINALASPSLNPWIIVMINTYQYVGIAMVVYLAGLQSIPKDYYEAA 200
BSNT_04408___ 185 QMDGAKQGQQFFTITLPLLMPSITINMVINIIGGLKLFDVIIALTAGGPG 234
||||||||||||||||||||||||||:|||||||||||||||||||||||
BSU30280___am 201 QMDGAKQGQQFFTITLPLLMPSITINIVINIIGGLKLFDVIIALTAGGPG 250
BSNT_04408___ 235 NASQSMSTFMYDLYFKRQDAGYAATQGIFMAFVILIISFCALAYFKRKET 284
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30280___am 251 NASQSMSTFMYDLYFKRQDAGYAATQGIFMAFVILIISFCALAYFKRKET 300
BSNT_04408___ 285 EMS 287
|||
BSU30280___am 301 EMS 303
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.