Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04408 and BSU30280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence dna-align/BSNT_04408___amyD.1.22522.seq
# -bsequence dna-align/BSU30280___amyD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04408___amyD-BSU30280___amyD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04408___amyD-BSU30280___amyD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04408___amyD
# 2: BSU30280___amyD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 912
# Identity: 854/912 (93.6%)
# Similarity: 854/912 (93.6%)
# Gaps: 48/912 ( 5.3%)
# Score: 4196.5
#
#
#=======================================
BSNT_04408___ 1 ATGAGTGAGATCGCAAGGGACGTTCATGTGAAACAGGTTAAGCCAAAAAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30280___am 1 ATGAGTGAGATCGCAAGGGACGTTCATGTGAAACAGGTTAAGCCAAAAAA 50
BSNT_04408___ 51 GCAGTCCTCACTTTGGTGGATGTACATTCCTGCTTTGCTCTCCGTTCTGG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30280___am 51 GCAGTCCTCACTTTGGTGGATGTACATTCCTGCTTTGCTCTCCGTTCTGG 100
BSNT_04408___ 101 TCTTTATGATTTATCCGTTTGTGAAAGGCACATTGATTACCTTTACAAAC 150
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU30280___am 101 TCTTTATGATTTACCCGTTTGTGAAAGGCACATTGATTACCTTTACAAAC 150
BSNT_04408___ 151 TGGAACGGCTTTTCACAAGTCTACCAATGGGTTGGATTCGCGCAATATGA 200
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU30280___am 151 TGGAACGGATTTTCACAAGTCTACCAATGGGTTGGATTCGCGCAATATGA 200
BSNT_04408___ 201 AAGGCTGTTTTCTGATCCTGACACTTGGCATATCTTAAAAAACACGCTGC 250
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU30280___am 201 AAGGCTGTTTTCTGATCCTGATACTTGGCATATCTTAAAAAACACGCTGC 250
BSNT_04408___ 251 TTTACGGGCTTGGCAGCACTTTTTTTCAAAATGTGGTCGGGCTTCTATAC 300
.||||||||||||||||||.||||||||||||||||||||||||||.|||
BSU30280___am 251 ATTACGGGCTTGGCAGCACCTTTTTTCAAAATGTGGTCGGGCTTCTGTAC 300
BSNT_04408___ 301 GCTCTGCTCTTAAATCAAAGCATTAAAACGAAAGCGGTAACAAGAACAAT 350
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU30280___am 301 GCTCTCCTCTTAAATCAAAGCATTAAAACGAAAGCGGTAACAAGAACAAT 350
BSNT_04408___ 351 TGTGTATTTGCCGGTGATGATCAGCCCGCTCATTATGGGCTACATTTGGT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30280___am 351 TGTGTATTTGCCGGTGATGATCAGCCCGCTCATTATGGGCTACATTTGGT 400
BSNT_04408___ 401 ACTTTTTCTTCTCCTATGACGGAGGCGCGCTCAATGATTTGCTCGGGGTC 450
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU30280___am 401 ACTTTTTCTTCTCCTATGACGGAGGCGCGCTCAACGATTTGCTCGGGGTC 450
BSNT_04408___ 451 TTCGGCATCAGCCCTATTAATGCGCTCGCCAGTCCCTC------------ 488
||||||||||||||||||||||||||||||||||||||
BSU30280___am 451 TTCGGCATCAGCCCTATTAATGCGCTCGCCAGTCCCTCGCTCAATCCATG 500
BSNT_04408___ 489 ------------------------------------GATCGCTATGGTTG 502
||||||||||||||
BSU30280___am 501 GATCATTGTCATGATTAACACCTATCAATATGTCGGGATCGCTATGGTTG 550
BSNT_04408___ 503 TCTACTTAGCCGGTCTGCAAAGCATTCCGAAAGACTACTATGAAGCGGCG 552
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30280___am 551 TCTACTTAGCCGGTCTGCAAAGCATTCCGAAAGACTACTATGAAGCGGCG 600
BSNT_04408___ 553 CAAATGGATGGCGCGAAACAAGGCCAGCAGTTTTTTACCATCACGCTGCC 602
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30280___am 601 CAAATGGATGGCGCGAAACAAGGCCAGCAGTTTTTTACCATCACGCTGCC 650
BSNT_04408___ 603 GCTGTTAATGCCCTCCATTACCATTAATATGGTCATCAACATTATCGGAG 652
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU30280___am 651 GCTGTTAATGCCCTCCATTACCATTAATATAGTCATCAACATTATCGGAG 700
BSNT_04408___ 653 GCTTAAAGCTGTTTGACGTCATCATTGCACTCACCGCTGGCGGCCCCGGA 702
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU30280___am 701 GCTTAAAGCTGTTTGACGTCATCATTGCACTCACCGCAGGCGGCCCCGGA 750
BSNT_04408___ 703 AATGCGTCACAATCCATGTCCACGTTTATGTATGATTTGTATTTCAAACG 752
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30280___am 751 AATGCGTCACAATCCATGTCCACGTTTATGTATGATTTGTATTTCAAACG 800
BSNT_04408___ 753 GCAGGATGCCGGCTATGCCGCAACGCAAGGCATATTTATGGCATTTGTCA 802
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30280___am 801 GCAGGATGCCGGCTATGCCGCAACGCAAGGCATATTTATGGCATTTGTCA 850
BSNT_04408___ 803 TTTTGATCATCAGCTTTTGCGCGCTTGCGTACTTTAAAAGAAAGGAGACG 852
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30280___am 851 TTTTGATCATCAGCTTTTGCGCGCTTGCGTACTTTAAAAGAAAGGAGACG 900
BSNT_04408___ 853 GAAATGTCATGA 864
||||||||||||
BSU30280___am 901 GAAATGTCATGA 912
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