Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04362 and BSU29920

See DNA alignment / Visit BSNT_04362 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence pep-align/BSNT_04362___ytmP.1.22522.seq
#    -bsequence pep-align/BSU29920___ytmP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04362___ytmP-BSU29920___ytmP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04362___ytmP-BSU29920___ytmP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04362___ytmP
# 2: BSU29920___ytmP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity:     204/265 (77.0%)
# Similarity:   204/265 (77.0%)
# Gaps:          61/265 (23.0%)
# Score: 1091.0
# 
#
#=======================================

BSNT_04362___      1 MNWLGQLLGSDWEIFPAGGATGDAYYAKHNGQQLFLKRNSSPFLAVLSAE     50
                                                                       
BSU29920___yt      0 --------------------------------------------------      0

BSNT_04362___     51 GIVPKLVWTKRMENGDVITAQHWMTGRELKPKDMSGRPVAELLRKIHTSK    100
                                |||||||||||||||||||||||||||||||||||||||
BSU29920___yt      1 -----------MENGDVITAQHWMTGRELKPKDMSGRPVAELLRKIHTSK     39

BSNT_04362___    101 ALLDMLKRLGKEPLNPGALLSQLKQAVFAVQQSSPLIQEGIKYLEEHLHE    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt     40 ALLDMLKRLGKEPLNPGALLSQLKQAVFAVQQSSPLIQEGIKYLEEHLHE     89

BSNT_04362___    151 VHFGEKVVCHCDVNHNNWLLSEDNQLYLIDWDGAMIADPAMDLGPLLYHY    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt     90 VHFGEKVVCHCDVNHNNWLLSEDNQLYLIDWDGAMIADPAMDLGPLLYHY    139

BSNT_04362___    201 VEKPAWESWLSMYGIELTESLRLRMAWYVLSETITFIAWHKAKGNDKEFH    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt    140 VEKPAWESWLSMYGIELTESLRLRMAWYVLSETITFIAWHKAKGNDKEFH    189

BSNT_04362___    251 DAMEELHILMKRIVD    265
                     |||||||||||||||
BSU29920___yt    190 DAMEELHILMKRIVD    204


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