Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04362 and BSU29920
See
Amino acid alignment /
Visit
BSNT_04362 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence dna-align/BSNT_04362___ytmP.1.22522.seq
# -bsequence dna-align/BSU29920___ytmP.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04362___ytmP-BSU29920___ytmP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04362___ytmP-BSU29920___ytmP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04362___ytmP
# 2: BSU29920___ytmP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 798
# Identity: 614/798 (76.9%)
# Similarity: 614/798 (76.9%)
# Gaps: 183/798 (22.9%)
# Score: 3066.0
#
#
#=======================================
BSNT_04362___ 1 ATGAACTGGTTGGGACAATTACTAGGTAGCGATTGGGAGATCTTCCCCGC 50
BSU29920___yt 0 -------------------------------------------------- 0
BSNT_04362___ 51 CGGAGGAGCTACAGGAGATGCATATTATGCGAAACATAACGGGCAGCAGC 100
BSU29920___yt 0 -------------------------------------------------- 0
BSNT_04362___ 101 TTTTTTTAAAACGTAATAGCTCACCTTTTTTAGCTGTTTTATCCGCCGAA 150
BSU29920___yt 0 -------------------------------------------------- 0
BSNT_04362___ 151 GGCATTGTTCCGAAGCTGGTTTGGACAAAACGGATGGAAAATGGGGACGT 200
|||||||||||||||||
BSU29920___yt 1 ---------------------------------ATGGAAAATGGGGACGT 17
BSNT_04362___ 201 CATTACGGCCCAGCACTGGATGACCGGCAGAGAGCTGAAGCCTAAAGACA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt 18 CATTACGGCCCAGCACTGGATGACCGGCAGAGAGCTGAAGCCTAAAGACA 67
BSNT_04362___ 251 TGAGCGGACGGCCCGTTGCTGAATTGCTTCGTAAAATACACACATCGAAA 300
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU29920___yt 68 TGAGCGGACGGCCCGTTGCTGAATTGCTTCGTAAAATACACACATCAAAA 117
BSNT_04362___ 301 GCCTTGCTGGACATGCTGAAGAGACTTGGAAAAGAACCGCTGAACCCGGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt 118 GCCTTGCTGGACATGCTGAAGAGACTTGGAAAAGAACCGCTGAACCCGGG 167
BSNT_04362___ 351 GGCTCTTTTGTCTCAGCTGAAGCAGGCTGTATTTGCTGTGCAGCAATCTT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt 168 GGCTCTTTTGTCTCAGCTGAAGCAGGCTGTATTTGCTGTGCAGCAATCTT 217
BSNT_04362___ 401 CGCCGCTGATTCAAGAAGGGATCAAGTATTTGGAAGAACACCTGCATGAA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt 218 CGCCGCTGATTCAAGAAGGGATCAAGTATTTGGAAGAACACCTGCATGAA 267
BSNT_04362___ 451 GTGCATTTCGGTGAGAAAGTCGTTTGCCATTGTGATGTCAATCATAATAA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt 268 GTGCATTTCGGTGAGAAAGTCGTTTGCCATTGTGATGTCAATCATAATAA 317
BSNT_04362___ 501 CTGGCTATTGTCTGAAGACAACCAGCTGTATTTAATTGACTGGGACGGCG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt 318 CTGGCTATTGTCTGAAGACAACCAGCTGTATTTAATTGACTGGGACGGCG 367
BSNT_04362___ 551 CCATGATCGCTGATCCGGCGATGGACCTCGGGCCTTTGCTGTACCACTAC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt 368 CCATGATCGCTGATCCGGCGATGGACCTCGGGCCTTTGCTGTACCACTAC 417
BSNT_04362___ 601 GTCGAAAAGCCAGCTTGGGAGAGCTGGCTGAGCATGTACGGCATAGAGCT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt 418 GTCGAAAAGCCAGCTTGGGAGAGCTGGCTGAGCATGTACGGCATAGAGCT 467
BSNT_04362___ 651 GACAGAAAGCCTTCGGTTGCGAATGGCTTGGTATGTGTTATCTGAAACAA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt 468 GACAGAAAGCCTTCGGTTGCGAATGGCTTGGTATGTGTTATCTGAAACAA 517
BSNT_04362___ 701 TTACTTTCATTGCCTGGCATAAAGCAAAAGGCAATGATAAGGAATTTCAT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt 518 TTACTTTCATTGCCTGGCATAAAGCAAAAGGCAATGATAAGGAATTTCAT 567
BSNT_04362___ 751 GATGCAATGGAAGAGCTGCATATCCTCATGAAACGAATTGTTGATTAA 798
||||||||||||||||||||||||||||||||||||||||||||||||
BSU29920___yt 568 GATGCAATGGAAGAGCTGCATATCCTCATGAAACGAATTGTTGATTAA 615
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.