Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04355 and BSU29890

See DNA alignment / Visit BSNT_04355 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence pep-align/BSNT_04355___ytnP.1.22522.seq
#    -bsequence pep-align/BSU29890___ytnP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04355___ytnP-BSU29890___ytnP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04355___ytnP-BSU29890___ytnP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04355___ytnP
# 2: BSU29890___ytnP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     229/284 (80.6%)
# Similarity:   235/284 (82.7%)
# Gaps:          34/284 (12.0%)
# Score: 1204.0
# 
#
#=======================================

BSNT_04355___      1 METMKIGNITLTWLDGGVTHMDGGAMFGVVPKPLWSKKYPVNEKNQIELR     50
                                              |||||||||||||||||||||||||
BSU29890___yt      1 -------------------------MFGVVPKPLWSKKYPVNEKNQIELR     25

BSNT_04355___     51 TDPILIQKDGLNIIVDAGIGSGKLTDKQKRNYGVTQESNVKPSLAALGLT    100
                     ||||||||||||||:|||||.|||||||||||||||||||||||||||||
BSU29890___yt     26 TDPILIQKDGLNIIIDAGIGYGKLTDKQKRNYGVTQESNVKPSLAALGLT     75

BSNT_04355___    101 VADIDVIAMTHLHFDHACGLTEYEGERLVSVFPNAVIYTSAVEWDEMRHP    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt     76 VADIDVIAMTHLHFDHACGLTEYEGERLVSVFPNAVIYTSAVEWDEMRHP    125

BSNT_04355___    151 NIRSKNTYWKENWEAVAGQVKTFEDTLTITEGITMHHTGGHSDGHSVLIC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt    126 NIRSKNTYWKENWEAVAGQVKTFEDTLTITEGITMHHTGGHSDGHSVLIC    175

BSNT_04355___    201 EDAGETAVHMADLMPTHAHRNPLWVLAYDDYPMTSIPQKQKWQAFAAEKD    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt    176 EDAGETAVHMADLMPTHAHRNPLWVLAYDDYPMTSIPQKQKWQAFAAEKD    225

BSNT_04355___    251 AGLFFIMMPNIARFNGMR-TEASKIQSSE-----    278
                     |...|.   :.|.:..:: .|...|:.|.     
BSU29890___yt    226 AWFIFY---HDAEYRALQWEEDGSIKKSVKRMKR    256


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