Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04355 and BSU29890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence dna-align/BSNT_04355___ytnP.1.22522.seq
# -bsequence dna-align/BSU29890___ytnP.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04355___ytnP-BSU29890___ytnP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04355___ytnP-BSU29890___ytnP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04355___ytnP
# 2: BSU29890___ytnP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 846
# Identity: 751/846 (88.8%)
# Similarity: 751/846 (88.8%)
# Gaps: 84/846 ( 9.9%)
# Score: 3701.0
#
#
#=======================================
BSNT_04355___ 1 ATGGAAACAATGAAAATTGGAAACATCACGTTGACCTGGCTTGACGGAGG 50
BSU29890___yt 0 -------------------------------------------------- 0
BSNT_04355___ 51 CGTGACGCATATGGACGGAGGCGCCATGTTCGGCGTTGTGCCAAAGCCGC 100
|||||||||||||||||||||||||
BSU29890___yt 1 -------------------------ATGTTCGGCGTTGTGCCAAAGCCGC 25
BSNT_04355___ 101 TTTGGTCTAAAAAATATCCAGTCAATGAAAAAAACCAGATTGAACTAAGG 150
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU29890___yt 26 TTTGGTCTAAAAAATATCCAGTCAATGAAAAAAACCAGATTGAACTAAGA 75
BSNT_04355___ 151 ACAGACCCTATTTTGATTCAAAAGGATGGGCTCAATATCATCGTTGACGC 200
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU29890___yt 76 ACAGACCCTATTTTGATTCAAAAGGATGGGCTCAATATCATCATTGACGC 125
BSNT_04355___ 201 CGGAATTGGGTCCGGCAAGCTGACTGATAAACAAAAACGAAACTATGGCG 250
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU29890___yt 126 CGGAATTGGGTACGGCAAGCTGACTGATAAACAAAAACGAAACTATGGCG 175
BSNT_04355___ 251 TGACACAAGAGTCGAATGTGAAACCCTCATTAGCTGCACTCGGATTAACG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt 176 TGACACAAGAGTCGAATGTGAAACCCTCATTAGCTGCACTCGGATTAACG 225
BSNT_04355___ 301 GTTGCCGATATAGATGTGATCGCAATGACACACCTTCATTTTGATCATGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt 226 GTTGCCGATATAGATGTGATCGCAATGACACACCTTCATTTTGATCATGC 275
BSNT_04355___ 351 ATGCGGTTTAACGGAATATGAAGGTGAACGGCTCGTCTCTGTCTTTCCGA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt 276 ATGCGGTTTAACGGAATATGAAGGTGAACGGCTCGTCTCTGTCTTTCCGA 325
BSNT_04355___ 401 ATGCAGTGATTTATACATCAGCTGTTGAATGGGACGAAATGCGCCATCCG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt 326 ATGCAGTGATTTATACATCAGCTGTTGAATGGGACGAAATGCGCCATCCG 375
BSNT_04355___ 451 AATATCAGGTCGAAAAATACGTATTGGAAAGAAAATTGGGAGGCTGTAGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt 376 AATATCAGGTCGAAAAATACGTATTGGAAAGAAAATTGGGAGGCTGTAGC 425
BSNT_04355___ 501 TGGCCAAGTCAAAACCTTTGAAGACACCTTAACGATCACAGAGGGTATTA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt 426 TGGCCAAGTCAAAACCTTTGAAGACACCTTAACGATCACAGAGGGTATTA 475
BSNT_04355___ 551 CAATGCATCACACCGGAGGCCATAGCGACGGACACAGTGTCCTGATATGC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt 476 CAATGCATCACACCGGAGGCCATAGCGACGGACACAGTGTCCTGATATGC 525
BSNT_04355___ 601 GAGGATGCGGGTGAAACTGCCGTACATATGGCAGATCTGATGCCGACACA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt 526 GAGGATGCGGGTGAAACTGCCGTACATATGGCAGATCTGATGCCGACACA 575
BSNT_04355___ 651 TGCCCACCGCAATCCGCTATGGGTGCTGGCTTACGATGATTATCCGATGA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt 576 TGCCCACCGCAATCCGCTATGGGTGCTGGCTTACGATGATTATCCGATGA 625
BSNT_04355___ 701 CCTCTATCCCGCAAAAGCAGAAATGGCAGGCGTTCGCAGCAGAAAAAGAC 750
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU29890___yt 626 CCTCTATCCCGCAAAAGCAGAAATGGCAGGCGTTCGCAGCAGAAAAAGAT 675
BSNT_04355___ 751 GC-TGGTTTATTTTTTATCATGATGCCGAATATCGCGCGCTTCAATGGGA 799
|| ||||||||||||||.|||||||||||.||||||||.|||||||||||
BSU29890___yt 676 GCTTGGTTTATTTTTTACCATGATGCCGAGTATCGCGCCCTTCAATGGGA 725
BSNT_04355___ 800 TGAGGACGGAAGCATCAAAGATTCAGTCAAGCGAATGA-------- 837
.||||||||||||||||||.|.|||||.||||||||||
BSU29890___yt 726 GGAGGACGGAAGCATCAAAAAGTCAGTTAAGCGAATGAAGCGATAG 771
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