Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04355 and BSU29890

See Amino acid alignment / Visit BSNT_04355 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence dna-align/BSNT_04355___ytnP.1.22522.seq
#    -bsequence dna-align/BSU29890___ytnP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04355___ytnP-BSU29890___ytnP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04355___ytnP-BSU29890___ytnP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04355___ytnP
# 2: BSU29890___ytnP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 846
# Identity:     751/846 (88.8%)
# Similarity:   751/846 (88.8%)
# Gaps:          84/846 ( 9.9%)
# Score: 3701.0
# 
#
#=======================================

BSNT_04355___      1 ATGGAAACAATGAAAATTGGAAACATCACGTTGACCTGGCTTGACGGAGG     50
                                                                       
BSU29890___yt      0 --------------------------------------------------      0

BSNT_04355___     51 CGTGACGCATATGGACGGAGGCGCCATGTTCGGCGTTGTGCCAAAGCCGC    100
                                              |||||||||||||||||||||||||
BSU29890___yt      1 -------------------------ATGTTCGGCGTTGTGCCAAAGCCGC     25

BSNT_04355___    101 TTTGGTCTAAAAAATATCCAGTCAATGAAAAAAACCAGATTGAACTAAGG    150
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU29890___yt     26 TTTGGTCTAAAAAATATCCAGTCAATGAAAAAAACCAGATTGAACTAAGA     75

BSNT_04355___    151 ACAGACCCTATTTTGATTCAAAAGGATGGGCTCAATATCATCGTTGACGC    200
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU29890___yt     76 ACAGACCCTATTTTGATTCAAAAGGATGGGCTCAATATCATCATTGACGC    125

BSNT_04355___    201 CGGAATTGGGTCCGGCAAGCTGACTGATAAACAAAAACGAAACTATGGCG    250
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU29890___yt    126 CGGAATTGGGTACGGCAAGCTGACTGATAAACAAAAACGAAACTATGGCG    175

BSNT_04355___    251 TGACACAAGAGTCGAATGTGAAACCCTCATTAGCTGCACTCGGATTAACG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt    176 TGACACAAGAGTCGAATGTGAAACCCTCATTAGCTGCACTCGGATTAACG    225

BSNT_04355___    301 GTTGCCGATATAGATGTGATCGCAATGACACACCTTCATTTTGATCATGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt    226 GTTGCCGATATAGATGTGATCGCAATGACACACCTTCATTTTGATCATGC    275

BSNT_04355___    351 ATGCGGTTTAACGGAATATGAAGGTGAACGGCTCGTCTCTGTCTTTCCGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt    276 ATGCGGTTTAACGGAATATGAAGGTGAACGGCTCGTCTCTGTCTTTCCGA    325

BSNT_04355___    401 ATGCAGTGATTTATACATCAGCTGTTGAATGGGACGAAATGCGCCATCCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt    326 ATGCAGTGATTTATACATCAGCTGTTGAATGGGACGAAATGCGCCATCCG    375

BSNT_04355___    451 AATATCAGGTCGAAAAATACGTATTGGAAAGAAAATTGGGAGGCTGTAGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt    376 AATATCAGGTCGAAAAATACGTATTGGAAAGAAAATTGGGAGGCTGTAGC    425

BSNT_04355___    501 TGGCCAAGTCAAAACCTTTGAAGACACCTTAACGATCACAGAGGGTATTA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt    426 TGGCCAAGTCAAAACCTTTGAAGACACCTTAACGATCACAGAGGGTATTA    475

BSNT_04355___    551 CAATGCATCACACCGGAGGCCATAGCGACGGACACAGTGTCCTGATATGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt    476 CAATGCATCACACCGGAGGCCATAGCGACGGACACAGTGTCCTGATATGC    525

BSNT_04355___    601 GAGGATGCGGGTGAAACTGCCGTACATATGGCAGATCTGATGCCGACACA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt    526 GAGGATGCGGGTGAAACTGCCGTACATATGGCAGATCTGATGCCGACACA    575

BSNT_04355___    651 TGCCCACCGCAATCCGCTATGGGTGCTGGCTTACGATGATTATCCGATGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29890___yt    576 TGCCCACCGCAATCCGCTATGGGTGCTGGCTTACGATGATTATCCGATGA    625

BSNT_04355___    701 CCTCTATCCCGCAAAAGCAGAAATGGCAGGCGTTCGCAGCAGAAAAAGAC    750
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU29890___yt    626 CCTCTATCCCGCAAAAGCAGAAATGGCAGGCGTTCGCAGCAGAAAAAGAT    675

BSNT_04355___    751 GC-TGGTTTATTTTTTATCATGATGCCGAATATCGCGCGCTTCAATGGGA    799
                     || ||||||||||||||.|||||||||||.||||||||.|||||||||||
BSU29890___yt    676 GCTTGGTTTATTTTTTACCATGATGCCGAGTATCGCGCCCTTCAATGGGA    725

BSNT_04355___    800 TGAGGACGGAAGCATCAAAGATTCAGTCAAGCGAATGA--------    837
                     .||||||||||||||||||.|.|||||.||||||||||        
BSU29890___yt    726 GGAGGACGGAAGCATCAAAAAGTCAGTTAAGCGAATGAAGCGATAG    771


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