Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04168 and BSU28560

See DNA alignment / Visit BSNT_04168 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence pep-align/BSNT_04168___lcfA.1.22522.seq
#    -bsequence pep-align/BSU28560___lcfA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04168___lcfA-BSU28560___lcfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04168___lcfA-BSU28560___lcfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04168___lcfA
# 2: BSU28560___lcfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 560
# Identity:     556/560 (99.3%)
# Similarity:   557/560 (99.5%)
# Gaps:           0/560 ( 0.0%)
# Score: 2909.0
# 
#
#=======================================

BSNT_04168___      1 MQSQKPWLAEYPNDIPHELPLPNKTLQSILTDSAARFPDKTAISFYGKKL     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc      1 MQSQKPWLAEYPNDIPHELPLPNKTLQSILTDSAARFPDKTAISFYGKKL     50

BSNT_04168___     51 TFHDILTDALKLAAFLQGNGLQKGDRVAVMLPNCPQTVISYYGVLFAGGI    100
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU28560___lc     51 TFHDILTDALKLAAFLQCNGLQKGDRVAVMLPNCPQTVISYYGVLFAGGI    100

BSNT_04168___    101 VVQTNPLYTEHELEYQLRDAQVSVIITLDLLFPKAIKMKTLSIVDQILIT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc    101 VVQTNPLYTEHELEYQLRDAQVSVIITLDLLFPKAIKMKTLSIVDQILIT    150

BSNT_04168___    151 SVKDYLPFPKNILYPLTQKQKVHIDFDKTANIHTFASSMKQEKTELLTIP    200
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU28560___lc    151 SVKDYLPFPKNILYPLTQKQKVHIDFDKTANIHTFASCMKQEKTELLTIP    200

BSNT_04168___    201 KIDPEHDIAVLQYTGGTTGAPKGVMLTHQNILANTEMCAAWMYDVKEGAE    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc    201 KIDPEHDIAVLQYTGGTTGAPKGVMLTHQNILANTEMCAAWMYDVKEGAE    250

BSNT_04168___    251 KVLGIVPFFHVYGLTAVMNYSIKLGFEMILLPKFDPLETLKIIDKHKPTL    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc    251 KVLGIVPFFHVYGLTAVMNYSIKLGFEMILLPKFDPLETLKIIDKHKPTL    300

BSNT_04168___    301 FPGAPTIYIGLLHHPELQHYDLSSIKSCLSGSAALPVEVKQKFEKVTGGK    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc    301 FPGAPTIYIGLLHHPELQHYDLSSIKSCLSGSAALPVEVKQKFEKVTGGK    350

BSNT_04168___    351 LVEGYGLSEASPVTHANFIWGKNKPGSIGCPWPSTDAAIYSEETGELAAP    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc    351 LVEGYGLSEASPVTHANFIWGKNKPGSIGCPWPSTDAAIYSEETGELAAP    400

BSNT_04168___    401 YEHGEIIVKGPQVMKGYWNKPEETAAVLRDGWLFTGDMGYMDEEGFFYIA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc    401 YEHGEIIVKGPQVMKGYWNKPEETAAVLRDGWLFTGDMGYMDEEGFFYIA    450

BSNT_04168___    451 DRKKDIIIAGGYNIYPREVEEALYEHEAIQEIVVAGVPDSYRGETVKAFV    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc    451 DRKKDIIIAGGYNIYPREVEEALYEHEAIQEIVVAGVPDSYRGETVKAFV    500

BSNT_04168___    501 VLKKGAKADAEELDAFARSRLAPYKVPKAYDFRKELPKTAVGKILRRRLL    550
                     |||||||||.||||||||||||||||||||:|||||||||||||||||||
BSU28560___lc    501 VLKKGAKADTEELDAFARSRLAPYKVPKAYEFRKELPKTAVGKILRRRLL    550

BSNT_04168___    551 EEETENHHIK    560
                     ||||||||||
BSU28560___lc    551 EEETENHHIK    560


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