Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04168 and BSU28560
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:34
# Commandline: needle
# -asequence dna-align/BSNT_04168___lcfA.1.22522.seq
# -bsequence dna-align/BSU28560___lcfA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04168___lcfA-BSU28560___lcfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04168___lcfA-BSU28560___lcfA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04168___lcfA
# 2: BSU28560___lcfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1683
# Identity: 1666/1683 (99.0%)
# Similarity: 1666/1683 (99.0%)
# Gaps: 0/1683 ( 0.0%)
# Score: 8262.0
#
#
#=======================================
BSNT_04168___ 1 ATGCAGTCTCAAAAGCCGTGGCTTGCCGAGTATCCCAACGATATCCCGCA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 1 ATGCAGTCTCAAAAGCCGTGGCTTGCCGAGTATCCCAACGATATCCCGCA 50
BSNT_04168___ 51 TGAGCTTCCGTTGCCGAATAAAACCCTGCAATCCATCCTGACAGACTCCG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 51 TGAGCTTCCGTTGCCGAATAAAACCCTGCAATCCATCCTGACAGACTCCG 100
BSNT_04168___ 101 CCGCACGATTCCCTGATAAAACCGCAATATCGTTTTATGGAAAAAAACTC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 101 CCGCACGATTCCCTGATAAAACCGCAATATCGTTTTATGGAAAAAAACTC 150
BSNT_04168___ 151 ACCTTTCATGACATTCTGACGGATGCTCTTAAACTTGCAGCTTTTTTGCA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 151 ACCTTTCATGACATTCTGACGGATGCTCTTAAACTTGCAGCTTTTTTGCA 200
BSNT_04168___ 201 GGGCAATGGCCTGCAAAAAGGAGACAGAGTGGCTGTTATGCTGCCCAATT 250
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 201 GTGCAATGGCCTGCAAAAAGGAGACAGAGTGGCTGTTATGCTGCCCAATT 250
BSNT_04168___ 251 GCCCGCAAACAGTGATTTCTTATTATGGCGTCTTGTTTGCCGGTGGCATC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 251 GCCCGCAAACAGTGATTTCTTATTATGGCGTCTTGTTTGCCGGTGGCATC 300
BSNT_04168___ 301 GTGGTGCAGACGAATCCGCTTTATACCGAGCACGAGCTTGAATACCAGCT 350
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU28560___lc 301 GTGGTGCAGACGAATCCGCTTTATACCGAGCATGAGCTTGAATACCAGCT 350
BSNT_04168___ 351 TAGAGATGCTCAGGTAAGTGTAATCATCACCTTAGATTTGCTTTTCCCGA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 351 TAGAGATGCTCAGGTAAGTGTAATCATCACCTTAGATTTGCTTTTCCCGA 400
BSNT_04168___ 401 AGGCAATAAAAATGAAAACGTTATCAATAGTCGACCAGATTTTGATAACC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 401 AGGCAATAAAAATGAAAACGTTATCAATAGTCGACCAGATTTTGATAACC 450
BSNT_04168___ 451 AGCGTAAAAGACTATTTGCCTTTTCCGAAGAATATTCTTTACCCGCTGAC 500
||.||||||||||||||||||||||||||.||||||||||||||||||||
BSU28560___lc 451 AGTGTAAAAGACTATTTGCCTTTTCCGAAAAATATTCTTTACCCGCTGAC 500
BSNT_04168___ 501 GCAAAAACAAAAAGTGCATATCGACTTTGACAAAACAGCTAACATTCACA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 501 GCAAAAACAAAAAGTGCATATCGACTTTGACAAAACAGCTAACATTCACA 550
BSNT_04168___ 551 CGTTCGCTTCCAGTATGAAGCAGGAAAAAACTGAACTCCTGACAATCCCG 600
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU28560___lc 551 CGTTCGCTTCCTGTATGAAGCAGGAAAAAACTGAACTCCTGACAATCCCG 600
BSNT_04168___ 601 AAGATCGATCCTGAGCATGATATCGCTGTCCTCCAGTATACCGGAGGAAC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 601 AAGATCGATCCTGAGCATGATATCGCTGTCCTCCAGTATACCGGAGGAAC 650
BSNT_04168___ 651 AACCGGAGCTCCAAAAGGGGTCATGCTCACGCACCAAAATATTTTGGCAA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 651 AACCGGAGCTCCAAAAGGGGTCATGCTCACGCACCAAAATATTTTGGCAA 700
BSNT_04168___ 701 ATACTGAAATGTGCGCCGCTTGGATGTATGACGTGAAAGAAGGCGCTGAA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 701 ATACTGAAATGTGCGCCGCTTGGATGTATGACGTGAAAGAAGGCGCTGAA 750
BSNT_04168___ 751 AAAGTGCTGGGCATCGTCCCGTTTTTTCATGTCTACGGACTGACGGCAGT 800
|||||||||||||||||.||.|||||||||||||||||||||||||||||
BSU28560___lc 751 AAAGTGCTGGGCATCGTTCCATTTTTTCATGTCTACGGACTGACGGCAGT 800
BSNT_04168___ 801 CATGAACTATTCGATTAAACTAGGCTTCGAAATGATTCTTCTTCCTAAGT 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 801 CATGAACTATTCGATTAAACTAGGCTTCGAAATGATTCTTCTTCCTAAGT 850
BSNT_04168___ 851 TTGATCCGCTCGAAACACTTAAAATCATCGACAAACACAAACCGACGCTC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 851 TTGATCCGCTCGAAACACTTAAAATCATCGACAAACACAAACCGACGCTC 900
BSNT_04168___ 901 TTTCCTGGCGCACCGACAATTTACATTGGCCTTTTGCATCACCCCGAATT 950
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU28560___lc 901 TTTCCTGGCGCACCGACAATTTACATTGGCCTTTTGCATCACCCTGAATT 950
BSNT_04168___ 951 GCAGCATTATGATCTGTCATCCATTAAAAGCTGTCTTAGCGGATCAGCCG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 951 GCAGCATTATGATCTGTCATCCATTAAAAGCTGTCTTAGCGGATCAGCCG 1000
BSNT_04168___ 1001 CGCTCCCTGTGGAGGTAAAGCAGAAATTTGAAAAGGTGACTGGCGGAAAG 1050
|||||||.|||||||||||||||||||||||||||||||||||.||||||
BSU28560___lc 1001 CGCTCCCCGTGGAGGTAAAGCAGAAATTTGAAAAGGTGACTGGTGGAAAG 1050
BSNT_04168___ 1051 CTTGTGGAAGGCTATGGTTTGTCTGAGGCATCCCCAGTGACGCACGCCAA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 1051 CTTGTGGAAGGCTATGGTTTGTCTGAGGCATCCCCAGTGACGCACGCCAA 1100
BSNT_04168___ 1101 TTTTATCTGGGGAAAAAACAAGCCGGGCAGTATCGGCTGTCCTTGGCCAA 1150
.|||||||||||||||||||||||||||||||||||||||||||||||.|
BSU28560___lc 1101 CTTTATCTGGGGAAAAAACAAGCCGGGCAGTATCGGCTGTCCTTGGCCGA 1150
BSNT_04168___ 1151 GTACGGACGCTGCGATCTATTCTGAAGAGACGGGTGAGCTTGCCGCTCCG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 1151 GTACGGACGCTGCGATCTATTCTGAAGAGACGGGTGAGCTTGCCGCTCCG 1200
BSNT_04168___ 1201 TATGAGCATGGAGAAATCATTGTAAAAGGTCCGCAAGTCATGAAAGGATA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 1201 TATGAGCATGGAGAAATCATTGTAAAAGGTCCGCAAGTCATGAAAGGATA 1250
BSNT_04168___ 1251 CTGGAATAAACCAGAGGAAACCGCCGCAGTGCTGAGAGATGGCTGGCTGT 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 1251 CTGGAATAAACCAGAGGAAACCGCCGCAGTGCTGAGAGATGGCTGGCTGT 1300
BSNT_04168___ 1301 TCACCGGGGACATGGGCTATATGGATGAAGAAGGCTTTTTCTATATTGCT 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 1301 TCACCGGGGACATGGGCTATATGGATGAAGAAGGCTTTTTCTATATTGCT 1350
BSNT_04168___ 1351 GACAGGAAGAAGGATATCATCATTGCCGGCGGTTACAATATTTACCCGCG 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 1351 GACAGGAAGAAGGATATCATCATTGCCGGCGGTTACAATATTTACCCGCG 1400
BSNT_04168___ 1401 TGAGGTAGAAGAAGCGCTTTATGAACATGAAGCCATACAGGAAATTGTTG 1450
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU28560___lc 1401 TGAGGTAGAAGAAGCGCTTTATGAACATGAAGCCATCCAGGAAATTGTTG 1450
BSNT_04168___ 1451 TTGCAGGCGTTCCCGATTCCTACAGGGGAGAAACAGTAAAAGCATTTGTC 1500
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 1451 TCGCAGGCGTTCCCGATTCCTACAGGGGAGAAACAGTAAAAGCATTTGTC 1500
BSNT_04168___ 1501 GTATTAAAGAAAGGCGCAAAAGCCGATGCAGAAGAACTGGACGCTTTTGC 1550
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU28560___lc 1501 GTATTAAAGAAAGGCGCAAAAGCCGATACAGAAGAACTGGACGCTTTTGC 1550
BSNT_04168___ 1551 GAGATCACGTCTAGCTCCCTATAAGGTGCCCAAAGCCTATGACTTCAGAA 1600
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU28560___lc 1551 GAGATCACGTCTAGCTCCCTATAAGGTGCCCAAAGCCTATGAGTTCAGAA 1600
BSNT_04168___ 1601 AGGAGTTGCCGAAAACGGCGGTGGGAAAAATTTTAAGAAGGCGTTTACTT 1650
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU28560___lc 1601 AGGAGCTGCCGAAAACGGCGGTGGGAAAAATTTTAAGAAGGCGTTTACTT 1650
BSNT_04168___ 1651 GAAGAAGAAACCGAAAATCATCATATCAAATAA 1683
|||||||||||||||||||||||||||||||||
BSU28560___lc 1651 GAAGAAGAAACCGAAAATCATCATATCAAATAA 1683
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