Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04148 and BSU28430

See DNA alignment / Visit BSNT_04148 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:31
# Commandline: needle
#    -asequence pep-align/BSNT_04148___sdhB.1.22522.seq
#    -bsequence pep-align/BSU28430___sdhB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04148___sdhB-BSU28430___sdhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04148___sdhB-BSU28430___sdhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04148___sdhB
# 2: BSU28430___sdhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 253
# Identity:     253/253 (100.0%)
# Similarity:   253/253 (100.0%)
# Gaps:           0/253 ( 0.0%)
# Score: 1351.0
# 
#
#=======================================

BSNT_04148___      1 MSEQKTIRFIITRQDTADSTPYDEEFEIPYRPNLNVISALMEIRRNPVNV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd      1 MSEQKTIRFIITRQDTADSTPYDEEFEIPYRPNLNVISALMEIRRNPVNV     50

BSNT_04148___     51 KGEKTTPVTWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPM    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd     51 KGEKTTPVTWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPM    100

BSNT_04148___    101 KTFPVVRDLQVDRSRMFDSLKKVKAWIPIDGTYDLGPGPRMPEKRRQWAY    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd    101 KTFPVVRDLQVDRSRMFDSLKKVKAWIPIDGTYDLGPGPRMPEKRRQWAY    150

BSNT_04148___    151 ELSKCMTCGVCLEACPNVNSKSKFMGPAPMSQVRLFNAHPTGAMNKSERL    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd    151 ELSKCMTCGVCLEACPNVNSKSKFMGPAPMSQVRLFNAHPTGAMNKSERL    200

BSNT_04148___    201 EALMDEGGLADCGNSQNCVQSCPKGIPLTTSIAALNRDTNLQAFRNFFGS    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd    201 EALMDEGGLADCGNSQNCVQSCPKGIPLTTSIAALNRDTNLQAFRNFFGS    250

BSNT_04148___    251 DRV    253
                     |||
BSU28430___sd    251 DRV    253


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