Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04148 and BSU28430

See Amino acid alignment / Visit BSNT_04148 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:31
# Commandline: needle
#    -asequence dna-align/BSNT_04148___sdhB.1.22522.seq
#    -bsequence dna-align/BSU28430___sdhB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04148___sdhB-BSU28430___sdhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04148___sdhB-BSU28430___sdhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04148___sdhB
# 2: BSU28430___sdhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 762
# Identity:     753/762 (98.8%)
# Similarity:   753/762 (98.8%)
# Gaps:           0/762 ( 0.0%)
# Score: 3729.0
# 
#
#=======================================

BSNT_04148___      1 ATGAGTGAACAAAAAACCATACGATTTATTATCACACGTCAAGATACAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd      1 ATGAGTGAACAAAAAACCATACGATTTATTATCACACGTCAAGATACAGC     50

BSNT_04148___     51 CGACAGCACGCCTTACGATGAAGAATTTGAGATTCCATACCGCCCGAATC    100
                     .||||||||||||||.||||||||||||||||||||||||||||||||||
BSU28430___sd     51 TGACAGCACGCCTTATGATGAAGAATTTGAGATTCCATACCGCCCGAATC    100

BSNT_04148___    101 TGAACGTCATTTCCGCTCTGATGGAAATCCGCCGGAATCCGGTTAATGTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd    101 TGAACGTCATTTCCGCTCTGATGGAAATCCGCCGGAATCCGGTTAATGTC    150

BSNT_04148___    151 AAAGGTGAGAAGACAACCCCTGTCACATGGGATATGAACTGTCTTGAGGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd    151 AAAGGTGAGAAGACAACCCCTGTCACATGGGATATGAACTGTCTTGAGGA    200

BSNT_04148___    201 AGTATGCGGCGCATGTTCAATGGTCATAAACGGAAAACCCCGCCAATCTT    250
                     ||||||||||||||||||||||||.||||||||||||||||||||.||||
BSU28430___sd    201 AGTATGCGGCGCATGTTCAATGGTTATAAACGGAAAACCCCGCCAGTCTT    250

BSNT_04148___    251 GCACGGCGCTTATCGACCAGCTTGAACAGCCGATCCGTTTAAAACCAATG    300
                     |.|||||||||||.|||||||||||||||||.||||||||||||||||||
BSU28430___sd    251 GTACGGCGCTTATTGACCAGCTTGAACAGCCAATCCGTTTAAAACCAATG    300

BSNT_04148___    301 AAAACATTCCCAGTCGTTCGTGATTTGCAGGTTGATCGCAGCAGAATGTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd    301 AAAACATTCCCAGTCGTTCGTGATTTGCAGGTTGATCGCAGCAGAATGTT    350

BSNT_04148___    351 TGATTCATTGAAAAAAGTAAAAGCATGGATACCGATTGACGGTACGTACG    400
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU28430___sd    351 TGATTCATTGAAAAAAGTAAAAGCGTGGATACCGATTGACGGTACGTACG    400

BSNT_04148___    401 ATTTAGGACCGGGGCCGAGAATGCCGGAAAAACGCCGTCAATGGGCATAT    450
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU28430___sd    401 ATTTAGGACCGGGGCCGAGAATGCCGGAAAAACGTCGTCAATGGGCATAT    450

BSNT_04148___    451 GAATTATCAAAATGCATGACATGCGGCGTCTGCCTCGAAGCTTGCCCGAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd    451 GAATTATCAAAATGCATGACATGCGGCGTCTGCCTCGAAGCTTGCCCGAA    500

BSNT_04148___    501 TGTGAACAGCAAATCGAAGTTCATGGGGCCTGCACCGATGTCGCAAGTCC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd    501 TGTGAACAGCAAATCGAAGTTCATGGGGCCTGCACCGATGTCGCAAGTCC    550

BSNT_04148___    551 GCCTGTTTAACGCGCATCCGACAGGCGCCATGAATAAATCTGAACGATTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd    551 GCCTGTTTAACGCGCATCCGACAGGCGCCATGAATAAATCTGAACGATTA    600

BSNT_04148___    601 GAAGCATTAATGGATGAAGGCGGCCTTGCAGATTGCGGCAACTCGCAAAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd    601 GAAGCATTAATGGATGAAGGCGGCCTTGCAGATTGCGGCAACTCGCAAAA    650

BSNT_04148___    651 CTGTGTTCAATCCTGTCCGAAGGGGATTCCGCTTACCACTTCGATTGCAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd    651 CTGTGTTCAATCCTGTCCGAAGGGGATTCCGCTTACCACTTCGATTGCAG    700

BSNT_04148___    701 CCTTGAATAGAGATACAAACTTACAAGCGTTCCGCAATTTCTTCGGAAGC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28430___sd    701 CCTTGAATAGAGATACAAACTTACAAGCGTTCCGCAATTTCTTCGGAAGC    750

BSNT_04148___    751 GACAGAGTATAA    762
                     ||||||||||||
BSU28430___sd    751 GACAGAGTATAA    762


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