Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04114 and BSU28320

See DNA alignment / Visit BSNT_04114 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence pep-align/BSNT_04114.1.22522.seq
#    -bsequence pep-align/BSU28320___ysnD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04114-BSU28320___ysnD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04114-BSU28320___ysnD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04114
# 2: BSU28320___ysnD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 111
# Identity:      82/111 (73.9%)
# Similarity:    87/111 (78.4%)
# Gaps:          16/111 (14.4%)
# Score: 443.0
# 
#
#=======================================

BSNT_04114         1 MNKSLADMQGFPAGFPSFPSFPQQYYPAVPPFYQQSHQPFGGYGYGQPFS     50
                     ||||.||||||||||||||:||||||||||||||||.|||||||||||||
BSU28320___ys      1 MNKSFADMQGFPAGFPSFPNFPQQYYPAVPPFYQQSQQPFGGYGYGQPFS     50

BSNT_04114        51 QAYSPLTTPSAMYSSYPYTSDFFGQQFSGTGFSG----------HSGGFS     90
                     ||||||||||.||||:||.|.|:||||||.||||          |:||||
BSU28320___ys     51 QAYSPLTTPSGMYSSFPYASGFYGQQFSGAGFSGHGGSLSAPAIHAGGFS    100

BSNT_04114        91 ----IXRGF--     95
                         : .||  
BSU28320___ys    101 GAPGVHGGFRY    111


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.