Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04114 and BSU28320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:30
# Commandline: needle
# -asequence dna-align/BSNT_04114.1.22522.seq
# -bsequence dna-align/BSU28320___ysnD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04114-BSU28320___ysnD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04114-BSU28320___ysnD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04114
# 2: BSU28320___ysnD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity: 258/336 (76.8%)
# Similarity: 258/336 (76.8%)
# Gaps: 48/336 (14.3%)
# Score: 1132.5
#
#
#=======================================
BSNT_04114 1 ATGAATAAATCATTAGCAGACATGCAAGGATTCCCTGCAGGCTTTCCAAG 50
||||||||||||||.|||||||||||||||||.|||||.|||||||||||
BSU28320___ys 1 ATGAATAAATCATTTGCAGACATGCAAGGATTTCCTGCGGGCTTTCCAAG 50
BSNT_04114 51 CTTCCCGAGCTTTCCGCAGCAGTATTATCCTGCTGTCCCTCCCTTTTACC 100
||||||.|.|||||||||||||||.|||||||||||||||||||||||||
BSU28320___ys 51 CTTCCCCAACTTTCCGCAGCAGTACTATCCTGCTGTCCCTCCCTTTTACC 100
BSNT_04114 101 AGCAAAGCCATCAGCCATTTGGAGGCTACGGATACGGACAGCCGTTCAGC 150
||||||||||.||||||||||||||||||||||||||||||||||||||.
BSU28320___ys 101 AGCAAAGCCAGCAGCCATTTGGAGGCTACGGATACGGACAGCCGTTCAGT 150
BSNT_04114 151 CAGGCATATAGCCCGTTAACCACTCCCTCTGCTATGTACTCCTCTTATCC 200
||||||||.||||||||||||||||||||||..|||||||||||.|..||
BSU28320___ys 151 CAGGCATACAGCCCGTTAACCACTCCCTCTGGAATGTACTCCTCATTCCC 200
BSNT_04114 201 ATACACTTCAGATTTTTTCGGGCAGCAATTTTCAGGCACTGGCTTCAGCG 250
||||.||||||..||||.|||.||||||||||||||..|.|||||.||||
BSU28320___ys 201 ATACGCTTCAGGATTTTACGGACAGCAATTTTCAGGTGCAGGCTTTAGCG 250
BSNT_04114 251 GCCATAGCGGCGGGTTCAGT-----------------------ATTC--- 274
|||||.|||||.|.||.||| ||||
BSU28320___ys 251 GCCATGGCGGCAGCTTAAGTGCTCCAGCGATACATGCCGGCGGATTCAGC 300
BSNT_04114 275 ---------------CNCGGGGGTTTTAG------- 288
| |||.||.|||||
BSU28320___ys 301 GGGGCGCCAGGCGTACACGGAGGCTTTAGATATTAA 336
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