Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04018 and BSU27700

See DNA alignment / Visit BSNT_04018 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:17
# Commandline: needle
#    -asequence pep-align/BSNT_04018___yajC.1.22522.seq
#    -bsequence pep-align/BSU27700___yrbF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04018___yajC-BSU27700___yrbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04018___yajC-BSU27700___yrbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04018___yajC
# 2: BSU27700___yrbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      88/89 (98.9%)
# Similarity:    88/89 (98.9%)
# Gaps:           1/89 ( 1.1%)
# Score: 431.0
# 
#
#=======================================

BSNT_04018___      1 MMTGTLGTLVPIILMFAVLYFLLIRPQQKQQKAVRQMQEELKKGDSVVTI     50
                      |||||||||||||||||||||||||||||||||||||||||||||||||
BSU27700___yr      1 -MTGTLGTLVPIILMFAVLYFLLIRPQQKQQKAVRQMQEELKKGDSVVTI     49

BSNT_04018___     51 GGLHGTVDSIDESKVVIKTGDNTRLTFDRRAIREVSAAE     89
                     |||||||||||||||||||||||||||||||||||||||
BSU27700___yr     50 GGLHGTVDSIDESKVVIKTGDNTRLTFDRRAIREVSAAE     88


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.