Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_04018 and BSU27700

See Amino acid alignment / Visit BSNT_04018 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:17
# Commandline: needle
#    -asequence dna-align/BSNT_04018___yajC.1.22522.seq
#    -bsequence dna-align/BSU27700___yrbF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04018___yajC-BSU27700___yrbF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04018___yajC-BSU27700___yrbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04018___yajC
# 2: BSU27700___yrbF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     267/270 (98.9%)
# Similarity:   267/270 (98.9%)
# Gaps:           3/270 ( 1.1%)
# Score: 1335.0
# 
#
#=======================================

BSNT_04018___      1 ATGATGACTGGCACTTTAGGTACATTGGTTCCTATTATTTTAATGTTTGC     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU27700___yr      1 ---ATGACTGGCACTTTAGGTACATTGGTTCCTATTATTTTAATGTTTGC     47

BSNT_04018___     51 GGTCCTTTACTTCTTGCTGATTCGTCCTCAGCAAAAGCAGCAAAAGGCTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27700___yr     48 GGTCCTTTACTTCTTGCTGATTCGTCCTCAGCAAAAGCAGCAAAAGGCTG     97

BSNT_04018___    101 TACGCCAAATGCAAGAGGAACTGAAAAAAGGCGATTCAGTAGTGACAATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27700___yr     98 TACGCCAAATGCAAGAGGAACTGAAAAAAGGCGATTCAGTAGTGACAATC    147

BSNT_04018___    151 GGGGGATTGCACGGTACTGTTGACTCTATCGACGAAAGCAAAGTCGTAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27700___yr    148 GGGGGATTGCACGGTACTGTTGACTCTATCGACGAAAGCAAAGTCGTAAT    197

BSNT_04018___    201 TAAGACTGGTGATAACACACGTCTTACGTTCGACCGCCGCGCGATCAGAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27700___yr    198 TAAGACTGGTGATAACACACGTCTTACGTTCGACCGCCGCGCGATCAGAG    247

BSNT_04018___    251 AAGTTTCTGCTGCTGAATAA    270
                     ||||||||||||||||||||
BSU27700___yr    248 AAGTTTCTGCTGCTGAATAA    267


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.