Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03994 and BSU27520

See DNA alignment / Visit BSNT_03994 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence pep-align/BSNT_03994.1.22522.seq
#    -bsequence pep-align/BSU27520___cymR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03994-BSU27520___cymR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03994-BSU27520___cymR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03994
# 2: BSU27520___cymR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 139
# Identity:     137/139 (98.6%)
# Similarity:   138/139 (99.3%)
# Gaps:           1/139 ( 0.7%)
# Score: 693.0
# 
#
#=======================================

BSNT_03994         1 MLKISTKGRYGLTIMIELAKKHGEGPTSLKSIAQTNNLSEHYLEQLVSPL     50
                      :||||||||||||||||||||||||||||||||||||||||||||||||
BSU27520___cy      1 -MKISTKGRYGLTIMIELAKKHGEGPTSLKSIAQTNNLSEHYLEQLVSPL     49

BSNT_03994        51 RNAGLVKSIRGAYGGYVLGSEPDAITAGDIIRVLEGPISPVEVLEDEEPA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27520___cy     50 RNAGLVKSIRGAYGGYVLGSEPDAITAGDIIRVLEGPISPVEVLEDEEPA     99

BSNT_03994       101 KRELWIRIRDAVKEVLDSTTLEDLASYTDGEQEAYMFYI    139
                     |||||||||||||||||||||||||||||||||||||||
BSU27520___cy    100 KRELWIRIRDAVKEVLDSTTLEDLASYTDGEQEAYMFYI    138


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