Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03994 and BSU27520

See Amino acid alignment / Visit BSNT_03994 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:13
# Commandline: needle
#    -asequence dna-align/BSNT_03994.1.22522.seq
#    -bsequence dna-align/BSU27520___cymR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03994-BSU27520___cymR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03994-BSU27520___cymR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03994
# 2: BSU27520___cymR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity:     416/420 (99.0%)
# Similarity:   416/420 (99.0%)
# Gaps:           3/420 ( 0.7%)
# Score: 2076.0
# 
#
#=======================================

BSNT_03994         1 ATGTTGAAAATATCAACTAAGGGAAGATACGGGCTCACCATTATGATCGA     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU27520___cy      1 ---TTGAAAATATCAACTAAGGGAAGATACGGGCTCACCATTATGATCGA     47

BSNT_03994        51 GCTTGCAAAAAAGCACGGTGAAGGCCCGACTTCATTAAAAAGCATCGCAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27520___cy     48 GCTTGCAAAAAAGCACGGTGAAGGCCCGACTTCATTAAAAAGCATCGCAC     97

BSNT_03994       101 AGACGAATAATTTGTCCGAGCATTATTTGGAGCAGCTGGTATCGCCGCTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27520___cy     98 AGACGAATAATTTGTCCGAGCATTATTTGGAGCAGCTGGTATCGCCGCTC    147

BSNT_03994       151 AGAAATGCCGGTTTAGTGAAAAGCATCAGAGGCGCATATGGCGGATATGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27520___cy    148 AGAAATGCCGGTTTAGTGAAAAGCATCAGAGGCGCATATGGCGGATATGT    197

BSNT_03994       201 ATTAGGCAGTGAGCCGGATGCCATTACCGCGGGAGATATTATCCGTGTGC    250
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU27520___cy    198 ATTAGGCAGTGAGCCGGATGCCATTACTGCGGGAGATATTATCCGTGTGC    247

BSNT_03994       251 TTGAGGGGCCGATCAGCCCTGTTGAAGTGCTGGAAGATGAGGAGCCTGCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27520___cy    248 TTGAGGGGCCGATCAGCCCTGTTGAAGTGCTGGAAGATGAGGAGCCTGCC    297

BSNT_03994       301 AAGCGTGAGCTCTGGATTCGCATCCGGGATGCTGTAAAAGAGGTTTTAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27520___cy    298 AAGCGTGAGCTCTGGATTCGCATCCGGGATGCTGTAAAAGAGGTTTTAGA    347

BSNT_03994       351 CAGTACAACATTAGAGGATCTTGCCAGCTATACAGACGGAGAGCAAGAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27520___cy    348 CAGTACAACATTAGAGGATCTTGCCAGCTATACAGACGGAGAGCAAGAAG    397

BSNT_03994       401 CTTATATGTTCTATATTTAG    420
                     ||||||||||||||||||||
BSU27520___cy    398 CTTATATGTTCTATATTTAG    417


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