Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03929 and BSU27120

See DNA alignment / Visit BSNT_03929 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence pep-align/BSNT_03929___sigV.1.22522.seq
#    -bsequence pep-align/BSU27120___sigV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03929___sigV-BSU27120___sigV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03929___sigV-BSU27120___sigV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03929___sigV
# 2: BSU27120___sigV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:     165/166 (99.4%)
# Similarity:   166/166 (100.0%)
# Gaps:           0/166 ( 0.0%)
# Score: 832.0
# 
#
#=======================================

BSNT_03929___      1 MKKKQTTKALLVTCITDHKQDFYRLAFSYVKNQDDALDIVQESIKKALSS     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27120___si      1 MKKKQTTKALLVTCITDHKQDFYRLAFSYVKNQDDALDIVQESIKKALSS     50

BSNT_03929___     51 VETVRNPETIKSWFYKILVRTAIDFLRKQKKIRVMDDETIEFLSKGKEDH    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27120___si     51 VETVRNPETIKSWFYKILVRTAIDFLRKQKKIRVMDDETIEFLSKGKEDH    100

BSNT_03929___    101 YKDTDLYEALDELPYRYKTIIILRFFEDLKLEEIAEITGENTNTVKTRLY    150
                     ||||||:|||||||||||||||||||||||||||||||||||||||||||
BSU27120___si    101 YKDTDLHEALDELPYRYKTIIILRFFEDLKLEEIAEITGENTNTVKTRLY    150

BSNT_03929___    151 RALKLMRIQLTKEDLS    166
                     ||||||||||||||||
BSU27120___si    151 RALKLMRIQLTKEDLS    166


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.