Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03929 and BSU27120

See Amino acid alignment / Visit BSNT_03929 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:04
# Commandline: needle
#    -asequence dna-align/BSNT_03929___sigV.1.22522.seq
#    -bsequence dna-align/BSU27120___sigV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03929___sigV-BSU27120___sigV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03929___sigV-BSU27120___sigV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03929___sigV
# 2: BSU27120___sigV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 501
# Identity:     496/501 (99.0%)
# Similarity:   496/501 (99.0%)
# Gaps:           0/501 ( 0.0%)
# Score: 2460.0
# 
#
#=======================================

BSNT_03929___      1 ATGAAGAAAAAACAAACAACAAAAGCGTTGCTTGTCACATGCATAACTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27120___si      1 ATGAAGAAAAAACAAACAACAAAAGCGTTGCTTGTCACATGCATAACTGA     50

BSNT_03929___     51 CCATAAGCAAGATTTCTACAGGTTGGCTTTCAGTTATGTGAAAAATCAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27120___si     51 CCATAAGCAAGATTTCTACAGGTTGGCTTTCAGTTATGTGAAAAATCAAG    100

BSNT_03929___    101 ATGACGCATTAGATATTGTTCAGGAATCGATAAAAAAAGCGCTGAGCTCA    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU27120___si    101 ATGACGCATTAGATATTGTTCAGGAATCTATAAAAAAAGCGCTGAGCTCA    150

BSNT_03929___    151 GTTGAAACGGTCAGGAACCCTGAGACGATAAAAAGCTGGTTTTATAAAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27120___si    151 GTTGAAACGGTCAGGAACCCTGAGACGATAAAAAGCTGGTTTTATAAAAT    200

BSNT_03929___    201 TTTAGTGCGGACAGCCATTGATTTTTTGCGCAAACAAAAAAAGATAAGAG    250
                     ||||||.||||||||||||||.||||||||||||||||||||||||||||
BSU27120___si    201 TTTAGTACGGACAGCCATTGACTTTTTGCGCAAACAAAAAAAGATAAGAG    250

BSNT_03929___    251 TGATGGACGACGAAACGATAGAATTTTTAAGCAAAGGAAAGGAAGACCAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27120___si    251 TGATGGACGACGAAACGATAGAATTTTTAAGCAAAGGAAAGGAAGACCAT    300

BSNT_03929___    301 TACAAGGATACTGATCTCTATGAAGCGCTTGACGAATTGCCGTACCGCTA    350
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU27120___si    301 TACAAGGATACTGATCTCCATGAAGCGCTTGACGAATTGCCGTACCGCTA    350

BSNT_03929___    351 TAAAACCATTATTATTTTACGTTTTTTTGAAGACCTCAAATTAGAAGAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27120___si    351 TAAAACCATTATTATTTTACGTTTTTTTGAAGACCTCAAATTAGAAGAAA    400

BSNT_03929___    401 TTGCGGAAATTACAGGAGAAAACACGAATACCGTCAAAACGCGCCTATAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27120___si    401 TTGCGGAAATTACAGGAGAAAACACGAATACCGTCAAAACGCGCCTATAC    450

BSNT_03929___    451 AGAGCATTGAAGCTGATGCGCATTCAGCTGACGAAGGAGGATCTTTCTTA    500
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU27120___si    451 AGAGCATTGAAGCTGATGCGCATTCAGTTGACGAAGGAGGATCTTTCTTA    500

BSNT_03929___    501 A    501
                     |
BSU27120___si    501 A    501


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