Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03890 and BSU26800

See DNA alignment / Visit BSNT_03890 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence pep-align/BSNT_03890___yrpB.1.22522.seq
#    -bsequence pep-align/BSU26800___yrpB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03890___yrpB-BSU26800___yrpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03890___yrpB-BSU26800___yrpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03890___yrpB
# 2: BSU26800___yrpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity:     342/347 (98.6%)
# Similarity:   345/347 (99.4%)
# Gaps:           0/347 ( 0.0%)
# Score: 1754.0
# 
#
#=======================================

BSNT_03890___      1 MNEFMKKFSLTKPIIQAPMAGGITTPRLASAVSNQGALGSLASGYLTPDL     50
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU26800___yr      1 MNEFMKKFSLTKPIIQAPMAGGITKPRLASAVSNQGALGSLASGYLTPDL     50

BSNT_03890___     51 LEQQIKEMFELTDAPFQINVFVPLGLEMPPEDQIKKWKENIPLANQVNQF    100
                     |||||||:||||||||||||||||||||||:|||||||||||||||||||
BSU26800___yr     51 LEQQIKEIFELTDAPFQINVFVPLGLEMPPKDQIKKWKENIPLANQVNQF    100

BSNT_03890___    101 TSVQEEWDDFYQKIDLILKYKVKACSFTFDLPPEDAVKELKTAGCCLIGT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    101 TSVQEEWDDFYQKIDLILKYKVKACSFTFDLPPEDAVKELKTAGCCLIGT    150

BSNT_03890___    151 ASTVEEALLMEERGMDIVVLQGSEAGGHRGAFLPSKGESAVGLMALIPQA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    151 ASTVEEALLMEERGMDIVVLQGSEAGGHRGAFLPSKGESAVGLMALIPQA    200

BSNT_03890___    201 ADALSVPVIAAGGMIDHRGVKAALTLGAQGVQIGSAFLICHESNAHPVHK    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    201 ADALSVPVIAAGGMIDHRGVKAALTLGAQGVQIGSAFLICHESNAHPVHK    250

BSNT_03890___    251 QKILEANEADTKLTTLFSGKEARGIVNKWMEEKEQFETQTLPYPYQNTLT    300
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU26800___yr    251 QKILEANEADTKLTTLFSGKEARGIVNKWMEENEQFETQTLPYPYQNTLT    300

BSNT_03890___    301 KAMRQQASLQNNHDQMSLWAGQGIRSLTEEISVKQLLNQLCQEDIKI    347
                     |||||:|||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    301 KAMRQKASLQNNHDQMSLWAGQGIRSLTEEISVKQLLNQLCQEDIKI    347


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.