Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03890 and BSU26800

See Amino acid alignment / Visit BSNT_03890 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence dna-align/BSNT_03890___yrpB.1.22522.seq
#    -bsequence dna-align/BSU26800___yrpB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03890___yrpB-BSU26800___yrpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03890___yrpB-BSU26800___yrpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03890___yrpB
# 2: BSU26800___yrpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1044
# Identity:    1030/1044 (98.7%)
# Similarity:  1030/1044 (98.7%)
# Gaps:           0/1044 ( 0.0%)
# Score: 5094.0
# 
#
#=======================================

BSNT_03890___      1 ATGAATGAATTTATGAAGAAGTTTTCCTTAACAAAACCGATTATTCAAGC     50
                     |||||||||||||||||.||||||||.|||||||||||||||||||||||
BSU26800___yr      1 ATGAATGAATTTATGAAAAAGTTTTCTTTAACAAAACCGATTATTCAAGC     50

BSNT_03890___     51 TCCAATGGCTGGCGGTATTACAACGCCCCGACTTGCATCTGCAGTTTCGA    100
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU26800___yr     51 TCCAATGGCTGGCGGTATTACAAAGCCCCGACTTGCATCTGCAGTTTCGA    100

BSNT_03890___    101 ATCAAGGTGCTCTTGGCAGCTTAGCATCGGGGTATCTTACGCCAGACCTG    150
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU26800___yr    101 ATCAAGGTGCTCTTGGCAGCTTAGCATCGGGGTATCTTACGCCAGACCTC    150

BSNT_03890___    151 CTAGAACAACAGATAAAAGAAATGTTTGAGCTGACAGACGCTCCTTTTCA    200
                     |||||||||||.|||||||||||.||||||||||||||||||||||||||
BSU26800___yr    151 CTAGAACAACAAATAAAAGAAATATTTGAGCTGACAGACGCTCCTTTTCA    200

BSNT_03890___    201 AATTAATGTGTTTGTTCCGCTAGGTCTAGAGATGCCACCAGAAGATCAGA    250
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU26800___yr    201 AATTAATGTGTTTGTTCCGCTAGGTCTAGAGATGCCACCAAAAGATCAGA    250

BSNT_03890___    251 TTAAAAAGTGGAAAGAAAACATACCGTTAGCTAATCAAGTAAATCAATTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    251 TTAAAAAGTGGAAAGAAAACATACCGTTAGCTAATCAAGTAAATCAATTC    300

BSNT_03890___    301 ACATCTGTACAAGAAGAGTGGGATGACTTCTATCAAAAAATTGATCTAAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    301 ACATCTGTACAAGAAGAGTGGGATGACTTCTATCAAAAAATTGATCTAAT    350

BSNT_03890___    351 TTTAAAATATAAGGTTAAGGCTTGCTCATTCACTTTTGATCTGCCGCCTG    400
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    351 TTTAAAATACAAGGTTAAGGCTTGCTCATTCACTTTTGATCTGCCGCCTG    400

BSNT_03890___    401 AAGACGCAGTAAAGGAGCTAAAAACCGCTGGATGCTGTTTAATAGGAACC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    401 AAGACGCAGTAAAGGAGCTAAAAACCGCTGGATGCTGTTTAATAGGAACC    450

BSNT_03890___    451 GCTTCAACAGTAGAAGAAGCATTGTTAATGGAAGAACGGGGAATGGATAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    451 GCTTCAACAGTAGAAGAAGCATTGTTAATGGAAGAACGGGGAATGGATAT    500

BSNT_03890___    501 AGTAGTCCTTCAAGGAAGTGAAGCCGGTGGACATCGCGGAGCATTCTTAC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    501 AGTAGTCCTTCAAGGAAGTGAAGCCGGTGGACATCGCGGAGCATTCTTAC    550

BSNT_03890___    551 CTTCCAAAGGTGAATCTGCCGTAGGTTTAATGGCTCTGATTCCACAAGCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    551 CTTCCAAAGGTGAATCTGCCGTAGGTTTAATGGCTCTGATTCCACAAGCA    600

BSNT_03890___    601 GCAGATGCACTGAGCGTACCTGTCATAGCTGCTGGGGGAATGATAGACCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    601 GCAGATGCACTGAGCGTACCTGTCATAGCTGCTGGGGGAATGATAGACCA    650

BSNT_03890___    651 TAGAGGAGTAAAAGCAGCTTTAACCCTTGGAGCCCAAGGCGTTCAAATCG    700
                     .||||||||||||||||||||||||||.||||||||||||||||||||||
BSU26800___yr    651 CAGAGGAGTAAAAGCAGCTTTAACCCTCGGAGCCCAAGGCGTTCAAATCG    700

BSNT_03890___    701 GTTCTGCCTTTTTAATTTGTCACGAGAGTAACGCACATCCAGTACATAAA    750
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU26800___yr    701 GTTCTGCCTTTTTAATTTGTCACGAGAGTAACGCACATCCAGTGCATAAA    750

BSNT_03890___    751 CAGAAAATACTAGAAGCAAACGAAGCAGATACAAAGCTTACGACATTATT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    751 CAGAAAATACTAGAAGCAAACGAAGCAGATACAAAGCTTACGACATTATT    800

BSNT_03890___    801 TTCAGGTAAAGAGGCCAGAGGAATCGTAAATAAATGGATGGAAGAAAAAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU26800___yr    801 TTCAGGTAAAGAGGCCAGAGGAATCGTAAATAAATGGATGGAAGAAAATG    850

BSNT_03890___    851 AACAGTTTGAGACACAAACCCTTCCGTACCCTTATCAAAATACACTAACG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    851 AACAGTTTGAGACACAAACCCTTCCGTACCCTTATCAAAATACACTAACG    900

BSNT_03890___    901 AAGGCAATGAGACAGCAGGCTTCACTTCAAAATAACCATGATCAGATGTC    950
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU26800___yr    901 AAGGCAATGAGACAGAAGGCTTCACTTCAAAATAACCATGATCAGATGTC    950

BSNT_03890___    951 TTTATGGGCAGGTCAAGGGATACGGTCATTGACTGAGGAAATTTCGGTTA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26800___yr    951 TTTATGGGCAGGTCAAGGGATACGGTCATTGACTGAGGAAATTTCGGTTA   1000

BSNT_03890___   1001 AGCAGCTTTTAAATCAGCTTTGCCAAGAAGATATAAAAATATAG   1044
                     ||||||||||||||||||||||||||||.|||||||||||||||
BSU26800___yr   1001 AGCAGCTTTTAAATCAGCTTTGCCAAGAGGATATAAAAATATAG   1044


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03890 and BSU26800

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
