Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03888 and BSU26780

See DNA alignment / Visit BSNT_03888 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:59
# Commandline: needle
#    -asequence pep-align/BSNT_03888___yrdA.1.22522.seq
#    -bsequence pep-align/BSU26780___yrdA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03888___yrdA-BSU26780___yrdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03888___yrdA-BSU26780___yrdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03888___yrdA
# 2: BSU26780___yrdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity:     163/167 (97.6%)
# Similarity:   165/167 (98.8%)
# Gaps:           0/167 ( 0.0%)
# Score: 863.0
# 
#
#=======================================

BSNT_03888___      1 MFQTLDHFLKSWEFEADATQKLLNNLTDESLKQEITSQNWTLGRIAWHTV     50
                     ||||||||||||||||||||||||:|||||||||||||||||||||||||
BSU26780___yr      1 MFQTLDHFLKSWEFEADATQKLLNSLTDESLKQEITSQNWTLGRIAWHTV     50

BSNT_03888___     51 AAIRIITSNTDLTFHAPAEDYPVPTSAQFIADSYHQASNAFVQALKTQWT    100
                     |||.||||||||||.|||||||||||||||||||||||||||||||||||
BSU26780___yr     51 AAIGIITSNTDLTFQAPAEDYPVPTSAQFIADSYHQASNAFVQALKTQWT    100

BSNT_03888___    101 DHTLQERINFIGQQLPNGSLLMFLIQHQNHHRGQMTVLMRQAGLTVPGIY    150
                     ||||||||||||||:|||||||||||||||||||||||||||||||||||
BSU26780___yr    101 DHTLQERINFIGQQMPNGSLLMFLIQHQNHHRGQMTVLMRQAGLTVPGIY    150

BSNT_03888___    151 GPAKEEWAKFGLEAPKM    167
                     |||||||||||||||||
BSU26780___yr    151 GPAKEEWAKFGLEAPKM    167


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