Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_03758 and BSU25200

See DNA alignment / Visit BSNT_03758 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:46
# Commandline: needle
#    -asequence pep-align/BSNT_03758___sigA.1.22522.seq
#    -bsequence pep-align/BSU25200___sigA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03758___sigA-BSU25200___sigA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03758___sigA-BSU25200___sigA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03758___sigA
# 2: BSU25200___sigA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 371
# Identity:     370/371 (99.7%)
# Similarity:   371/371 (100.0%)
# Gaps:           0/371 ( 0.0%)
# Score: 1864.0
# 
#
#=======================================

BSNT_03758___      1 MADKQTHETELTFDQVKEQLTESGKKRGVLTYEEIAERMSSFEIESDQMD     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si      1 MADKQTHETELTFDQVKEQLTESGKKRGVLTYEEIAERMSSFEIESDQMD     50

BSNT_03758___     51 EYYEFLGEQGVELISENEETEDPNIQQLAKAEEEFDLNDLSVPPGVKIND    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si     51 EYYEFLGEQGVELISENEETEDPNIQQLAKAEEEFDLNDLSVPPGVKIND    100

BSNT_03758___    101 PVRMYLKEIGRVNLLSAKEEIAYAKKIEEGDEESKRRLAEANLRLVVSIA    150
                     ||||||||||||||||||||||||:|||||||||||||||||||||||||
BSU25200___si    101 PVRMYLKEIGRVNLLSAKEEIAYAQKIEEGDEESKRRLAEANLRLVVSIA    150

BSNT_03758___    151 KRYVGRGMLFLDLIQEGNMGLMKAVEKFDYRKGYKFSTYATWWIRQAITR    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si    151 KRYVGRGMLFLDLIQEGNMGLMKAVEKFDYRKGYKFSTYATWWIRQAITR    200

BSNT_03758___    201 AIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPTPEEIAEDMDLTP    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si    201 AIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPTPEEIAEDMDLTP    250

BSNT_03758___    251 EKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYELLK    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si    251 EKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYELLK    300

BSNT_03758___    301 EQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIE    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si    301 EQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIE    350

BSNT_03758___    351 AKALRKLRHPSRSKRLKDFLE    371
                     |||||||||||||||||||||
BSU25200___si    351 AKALRKLRHPSRSKRLKDFLE    371


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.