Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03758 and BSU25200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:46
# Commandline: needle
# -asequence dna-align/BSNT_03758___sigA.1.22522.seq
# -bsequence dna-align/BSU25200___sigA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03758___sigA-BSU25200___sigA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03758___sigA-BSU25200___sigA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03758___sigA
# 2: BSU25200___sigA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1116
# Identity: 1111/1116 (99.6%)
# Similarity: 1111/1116 (99.6%)
# Gaps: 0/1116 ( 0.0%)
# Score: 5535.0
#
#
#=======================================
BSNT_03758___ 1 ATGGCTGATAAACAAACCCACGAGACAGAATTAACATTCGACCAAGTAAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 1 ATGGCTGATAAACAAACCCACGAGACAGAATTAACATTCGACCAAGTAAA 50
BSNT_03758___ 51 AGAGCAATTAACAGAGTCTGGTAAAAAACGTGGCGTTTTGACATATGAAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 51 AGAGCAATTAACAGAGTCTGGTAAAAAACGTGGCGTTTTGACATATGAAG 100
BSNT_03758___ 101 AAATTGCTGAGCGTATGTCCAGCTTTGAAATTGAATCAGACCAAATGGAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 101 AAATTGCTGAGCGTATGTCCAGCTTTGAAATTGAATCAGACCAAATGGAT 150
BSNT_03758___ 151 GAGTATTATGAATTTTTAGGTGAACAAGGTGTTGAATTAATTAGTGAGAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 151 GAGTATTATGAATTTTTAGGTGAACAAGGTGTTGAATTAATTAGTGAGAA 200
BSNT_03758___ 201 TGAAGAAACAGAAGATCCTAATATTCAGCAGCTTGCCAAAGCCGAAGAAG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 201 TGAAGAAACAGAAGATCCTAATATTCAGCAGCTTGCCAAAGCCGAAGAAG 250
BSNT_03758___ 251 AATTTGACCTTAATGACCTAAGTGTACCGCCTGGCGTTAAAATCAATGAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 251 AATTTGACCTTAATGACCTAAGTGTACCGCCTGGCGTTAAAATCAATGAC 300
BSNT_03758___ 301 CCAGTTCGTATGTATTTAAAGGAAATTGGTCGGGTTAACCTTCTTTCTGC 350
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU25200___si 301 CCAGTTCGTATGTATTTAAAGGAAATCGGTCGGGTTAACCTTCTTTCTGC 350
BSNT_03758___ 351 AAAAGAAGAAATCGCCTACGCTAAAAAGATTGAAGAAGGTGACGAAGAAT 400
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU25200___si 351 AAAAGAAGAAATCGCCTACGCTCAAAAGATTGAAGAAGGTGACGAAGAAT 400
BSNT_03758___ 401 CTAAACGCAGATTGGCTGAAGCGAACCTGCGGCTTGTTGTCAGTATCGCA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 401 CTAAACGCAGATTGGCTGAAGCGAACCTGCGGCTTGTTGTCAGTATCGCA 450
BSNT_03758___ 451 AAACGGTATGTCGGACGCGGTATGCTGTTCCTTGATCTGATCCAGGAAGG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 451 AAACGGTATGTCGGACGCGGTATGCTGTTCCTTGATCTGATCCAGGAAGG 500
BSNT_03758___ 501 AAACATGGGTCTGATGAAAGCCGTTGAAAAATTTGATTATCGCAAAGGTT 550
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU25200___si 501 AAACATGGGCCTGATGAAAGCCGTTGAAAAATTTGATTATCGCAAAGGTT 550
BSNT_03758___ 551 ATAAATTCAGTACGTATGCTACGTGGTGGATCAGACAGGCGATTACACGT 600
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU25200___si 551 ATAAATTCAGTACGTATGCTACGTGGTGGATCAGACAGGCGATTACACGC 600
BSNT_03758___ 601 GCCATTGCCGATCAGGCGAGAACGATCCGGATTCCCGTTCATATGGTTGA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 601 GCCATTGCCGATCAGGCGAGAACGATCCGGATTCCCGTTCATATGGTTGA 650
BSNT_03758___ 651 AACCATTAATAAATTAATCCGTGTGCAGCGTCAATTACTGCAAGACTTAG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 651 AACCATTAATAAATTAATCCGTGTGCAGCGTCAATTACTGCAAGACTTAG 700
BSNT_03758___ 701 GCAGAGAACCAACACCTGAAGAAATTGCGGAAGATATGGATTTAACGCCT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 701 GCAGAGAACCAACACCTGAAGAAATTGCGGAAGATATGGATTTAACGCCT 750
BSNT_03758___ 751 GAAAAAGTACGCGAAATCTTAAAGATTGCTCAAGAGCCGGTATCTCTGGA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 751 GAAAAAGTACGCGAAATCTTAAAGATTGCTCAAGAGCCGGTATCTCTGGA 800
BSNT_03758___ 801 AACACCGATCGGTGAAGAGGATGACTCGCACCTTGGTGATTTCATTGAAG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 801 AACACCGATCGGTGAAGAGGATGACTCGCACCTTGGTGATTTCATTGAAG 850
BSNT_03758___ 851 ACCAAGAAGCAACTTCACCTTCTGACCACGCCGCATACGAGCTATTGAAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 851 ACCAAGAAGCAACTTCACCTTCTGACCACGCCGCATACGAGCTATTGAAA 900
BSNT_03758___ 901 GAGCAGCTGGAAGATGTGCTTGATACGTTAACTGATCGTGAAGAAAATGT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 901 GAGCAGCTGGAAGATGTGCTTGATACGTTAACTGATCGTGAAGAAAATGT 950
BSNT_03758___ 951 ATTGCGTCTTCGATTCGGTCTTGATGACGGCCGTACAAGAACATTAGAAG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 951 ATTGCGTCTTCGATTCGGTCTTGATGACGGCCGTACAAGAACATTAGAAG 1000
BSNT_03758___ 1001 AGGTCGGCAAAGTATTTGGAGTAACGAGAGAGCGTATTCGACAAATCGAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 1001 AGGTCGGCAAAGTATTTGGAGTAACGAGAGAGCGTATTCGACAAATCGAA 1050
BSNT_03758___ 1051 GCCAAAGCGTTGCGGAAACTAAGACATCCTAGCAGAAGTAAACGTTTGAA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25200___si 1051 GCCAAAGCGTTGCGGAAACTAAGACATCCTAGCAGAAGTAAACGTTTGAA 1100
BSNT_03758___ 1101 AGATTTCCTCGAATAA 1116
|||||||||.||||||
BSU25200___si 1101 AGATTTCCTTGAATAA 1116
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