Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03727 and BSU24960

See DNA alignment / Visit BSNT_03727 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence pep-align/BSNT_03727___pstBA.1.22522.seq
#    -bsequence pep-align/BSU24960___pstBA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03727___pstBA-BSU24960___pstBA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03727___pstBA-BSU24960___pstBA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03727___pstBA
# 2: BSU24960___pstBA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     267/290 (92.1%)
# Similarity:   268/290 (92.4%)
# Gaps:          21/290 ( 7.2%)
# Score: 1350.0
# 
#
#=======================================

BSNT_03727___      1 MAWHDDLQEAYGKLERKEAKNMSEQMVKEKPERAVIVPKQNHVLEVKDLS     50
                                          |||||||||||||||||||||||||||||
BSU24960___ps      1 ---------------------MSEQMVKEKPERAVIVPKQNHVLEVKDLS     29

BSNT_03727___     51 IFYGNKQAVHHVNMDIEKNAVTALIGPSGCGKSTFLRNINRMNDLIPSAR    100
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps     30 IYYGNKQAVHHVNMDIEKNAVTALIGPSGCGKSTFLRNINRMNDLIPSAR     79

BSNT_03727___    101 AEGEILYEGLNILGGNINVVSLRREIGMVFQKPNPFPKSIYANITHALKY    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps     80 AEGEILYEGLNILGGNINVVSLRREIGMVFQKPNPFPKSIYANITHALKY    129

BSNT_03727___    151 AGERNKAVLDGIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIART    200
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU24960___ps    130 AGERNKAVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCIART    179

BSNT_03727___    201 LAMKPAVLLLDEPASALDPISNAKIEELITGLKREYSIIIVTHNMQQALR    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps    180 LAMKPAVLLLDEPASALDPISNAKIEELITGLKREYSIIIVTHNMQQALR    229

BSNT_03727___    251 VSDRTAFFLNGELVEYGQTEQIFTSPKKQKTEDYINGKFG    290
                     ||||||||||||||||||||||||||||||||||||||||
BSU24960___ps    230 VSDRTAFFLNGELVEYGQTEQIFTSPKKQKTEDYINGKFG    269


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.