Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_03727 and BSU24960

See Amino acid alignment / Visit BSNT_03727 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:42
# Commandline: needle
#    -asequence dna-align/BSNT_03727___pstBA.1.22522.seq
#    -bsequence dna-align/BSU24960___pstBA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03727___pstBA-BSU24960___pstBA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03727___pstBA-BSU24960___pstBA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03727___pstBA
# 2: BSU24960___pstBA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity:     802/873 (91.9%)
# Similarity:   802/873 (91.9%)
# Gaps:          63/873 ( 7.2%)
# Score: 3978.0
# 
#
#=======================================

BSNT_03727___      1 ATGGCTTGGCACGATGATCTACAAGAAGCTTACGGCAAATTAGAACGGAA     50
                                                                       
BSU24960___ps      0 --------------------------------------------------      0

BSNT_03727___     51 AGAGGCGAAAAACATGTCTGAACAAATGGTAAAAGAAAAACCTGAGCGAG    100
                                  |||||||||||||||||||||||||||||||||||||
BSU24960___ps      1 -------------ATGTCTGAACAAATGGTAAAAGAAAAACCTGAGCGAG     37

BSNT_03727___    101 CTGTTATTGTTCCGAAGCAGAACCACGTGCTTGAGGTCAAAGATCTGTCT    150
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU24960___ps     38 CTGTTATTGTTCCGAAGCAGAACCACGTGCTTGAGGTCAAAGATCTGTCC     87

BSNT_03727___    151 ATTTTTTACGGAAATAAACAAGCCGTTCATCATGTAAACATGGATATTGA    200
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps     88 ATTTATTACGGAAATAAACAAGCCGTTCATCATGTAAACATGGATATTGA    137

BSNT_03727___    201 AAAAAATGCGGTGACTGCTTTAATTGGGCCGTCGGGATGCGGAAAATCTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps    138 AAAAAATGCGGTGACTGCTTTAATTGGGCCGTCGGGATGCGGAAAATCTA    187

BSNT_03727___    251 CTTTTTTGAGAAATATTAACCGAATGAACGATTTAATTCCATCTGCAAGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps    188 CTTTTTTGAGAAATATTAACCGAATGAACGATTTAATTCCATCTGCAAGA    237

BSNT_03727___    301 GCGGAAGGTGAAATCCTTTATGAAGGATTAAATATATTGGGCGGCAATAT    350
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU24960___ps    238 GCGGAAGGTGAAATCCTTTATGAGGGATTAAATATATTGGGCGGCAATAT    287

BSNT_03727___    351 TAACGTTGTCAGCTTGAGAAGAGAAATCGGAATGGTTTTCCAAAAACCAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps    288 TAACGTTGTCAGCTTGAGAAGAGAAATCGGAATGGTTTTCCAAAAACCAA    337

BSNT_03727___    401 ATCCATTTCCGAAATCGATCTATGCGAATATCACACATGCATTGAAATAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps    338 ATCCATTTCCGAAATCGATCTATGCGAATATCACACATGCATTGAAATAT    387

BSNT_03727___    451 GCCGGAGAGCGGAATAAAGCTGTTTTAGATGGAATTGTGGAAGAAAGTTT    500
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU24960___ps    388 GCCGGAGAGCGGAATAAAGCTGTTTTAGATGAAATTGTGGAAGAAAGTTT    437

BSNT_03727___    501 AACAAAAGCGGCTCTCTGGGATGAGGTGAAGGATCGTTTACATTCATCCG    550
                     |||||||||.||.|||||||||||||||||||||||||||||||||||||
BSU24960___ps    438 AACAAAAGCAGCGCTCTGGGATGAGGTGAAGGATCGTTTACATTCATCCG    487

BSNT_03727___    551 CACTCTCGTTATCCGGCGGCCAGCAGCAGCGTTTATGCATCGCGAGAACG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps    488 CACTCTCGTTATCCGGCGGCCAGCAGCAGCGTTTATGCATCGCGAGAACG    537

BSNT_03727___    601 CTTGCGATGAAGCCGGCTGTTCTTCTGCTTGATGAACCAGCTTCAGCGCT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps    538 CTTGCGATGAAGCCGGCTGTTCTTCTGCTTGATGAACCAGCTTCAGCGCT    587

BSNT_03727___    651 TGATCCGATTTCAAATGCGAAAATAGAGGAATTAATTACAGGATTGAAAA    700
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU24960___ps    588 TGATCCGATTTCAAATGCAAAAATAGAGGAATTAATTACAGGATTGAAAA    637

BSNT_03727___    701 GAGAATACTCAATTATTATTGTCACGCACAATATGCAGCAGGCTCTGCGG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps    638 GAGAATACTCAATTATTATTGTCACGCACAATATGCAGCAGGCTCTGCGG    687

BSNT_03727___    751 GTTTCTGACCGGACGGCATTCTTTTTAAACGGCGAGCTTGTAGAATACGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps    688 GTTTCTGACCGGACGGCATTCTTTTTAAACGGCGAGCTTGTAGAATACGG    737

BSNT_03727___    801 ACAGACCGAACAGATTTTCACGAGTCCGAAAAAGCAAAAGACAGAGGATT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24960___ps    738 ACAGACCGAACAGATTTTCACGAGTCCGAAAAAGCAAAAGACAGAGGATT    787

BSNT_03727___    851 ATATTAATGGGAAATTCGGATAG    873
                     |||||||.|||||||||||||||
BSU24960___ps    788 ATATTAACGGGAAATTCGGATAG    810


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03727 and BSU24960

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
