Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03718 and BSU24890
See
DNA alignment /
Visit
BSNT_03718 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:41
# Commandline: needle
# -asequence pep-align/BSNT_03718___yqgN.1.22522.seq
# -bsequence pep-align/BSU24890___yqgN.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03718___yqgN-BSU24890___yqgN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03718___yqgN-BSU24890___yqgN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03718___yqgN
# 2: BSU24890___yqgN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity: 184/187 (98.4%)
# Similarity: 186/187 (99.5%)
# Gaps: 0/187 ( 0.0%)
# Score: 976.0
#
#
#=======================================
BSNT_03718___ 1 MKSQLRKKTLEALSALSNEDILQKTERMYKYLFSLPEWQNAGTIAVTISR 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24890___yq 1 MKSQLRKKTLEALSALSNEDILQKTERMYKYLFSLPEWQNAGTIAVTISR 50
BSNT_03718___ 51 GLEIPTRPVIEQAWEEGKQVCIPKCHPDTKKMQFRTYQTDDQLETVYAGL 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24890___yq 51 GLEIPTRPVIEQAWEEGKQVCIPKCHPDTKKMQFRTYQTDDQLETVYAGL 100
BSNT_03718___ 101 LEPVIEKTKEVNPSQIDLMIVPGVCFDVNGFRVGFGGGYYDRYLSEYEGK 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24890___yq 101 LEPVIEKTKEVNPSQIDLMIVPGVCFDVNGFRVGFGGGYYDRYLSEYEGK 150
BSNT_03718___ 151 TVSLLLECQLYAHVPSLPHDIPVHKLVTEDRIISCFS 187
||||||||||:||||.||||||||||:||||||||||
BSU24890___yq 151 TVSLLLECQLFAHVPRLPHDIPVHKLITEDRIISCFS 187
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.