Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03718 and BSU24890

See Amino acid alignment / Visit BSNT_03718 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:41
# Commandline: needle
#    -asequence dna-align/BSNT_03718___yqgN.1.22522.seq
#    -bsequence dna-align/BSU24890___yqgN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03718___yqgN-BSU24890___yqgN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03718___yqgN-BSU24890___yqgN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03718___yqgN
# 2: BSU24890___yqgN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 564
# Identity:     556/564 (98.6%)
# Similarity:   556/564 (98.6%)
# Gaps:           0/564 ( 0.0%)
# Score: 2748.0
# 
#
#=======================================

BSNT_03718___      1 ATGAAATCACAATTAAGAAAAAAGACGCTGGAGGCACTATCTGCTTTATC     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU24890___yq      1 ATGAAATCACAATTAAGAAAAAAGACGCTGGAGGCACTGTCTGCTTTATC     50

BSNT_03718___     51 AAATGAAGATATTCTTCAAAAAACGGAACGTATGTATAAGTACTTGTTTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24890___yq     51 AAATGAAGATATTCTTCAAAAAACGGAACGTATGTATAAGTACTTGTTTT    100

BSNT_03718___    101 CTCTGCCGGAGTGGCAAAATGCCGGCACCATTGCCGTCACTATTTCCAGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24890___yq    101 CTCTGCCGGAGTGGCAAAATGCCGGCACCATTGCCGTCACTATTTCCAGA    150

BSNT_03718___    151 GGATTAGAGATACCGACGCGTCCTGTCATTGAGCAGGCTTGGGAAGAAGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24890___yq    151 GGATTAGAGATACCGACGCGTCCTGTCATTGAGCAGGCTTGGGAAGAAGG    200

BSNT_03718___    201 GAAACAAGTTTGCATCCCAAAATGCCATCCGGACACGAAGAAAATGCAAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24890___yq    201 GAAACAAGTTTGCATCCCAAAATGCCATCCGGACACGAAGAAAATGCAAT    250

BSNT_03718___    251 TTCGCACATATCAGACTGATGATCAGCTCGAAACCGTGTATGCCGGACTG    300
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU24890___yq    251 TTCGCACATATCAGACTGATGATCAGCTCGAAACCGTGTACGCCGGACTG    300

BSNT_03718___    301 CTCGAGCCGGTAATTGAAAAAACAAAAGAAGTAAACCCATCACAAATTGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24890___yq    301 CTCGAGCCGGTAATTGAAAAAACAAAAGAAGTAAACCCATCACAAATTGA    350

BSNT_03718___    351 CTTGATGATCGTTCCAGGTGTTTGTTTTGATGTTAACGGGTTTAGGGTCG    400
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU24890___yq    351 CTTGATGATCGTTCCGGGTGTTTGTTTTGATGTTAACGGGTTTAGGGTCG    400

BSNT_03718___    401 GCTTTGGAGGCGGCTATTATGATCGCTATTTAAGTGAATATGAAGGGAAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24890___yq    401 GCTTTGGAGGCGGCTATTATGATCGCTATTTAAGTGAATATGAAGGGAAG    450

BSNT_03718___    451 ACAGTCTCATTGCTTTTGGAGTGCCAGTTGTATGCGCACGTACCCAGTCT    500
                     ||||||||.||||||||||||||||||||||.|||||||||||||.||||
BSU24890___yq    451 ACAGTCTCTTTGCTTTTGGAGTGCCAGTTGTTTGCGCACGTACCCCGTCT    500

BSNT_03718___    501 GCCGCATGACATCCCGGTACATAAGCTTGTAACAGAGGATCGGATTATTT    550
                     |||||||||||||||||||||||||||..|||||||||||||||||||||
BSU24890___yq    501 GCCGCATGACATCCCGGTACATAAGCTGATAACAGAGGATCGGATTATTT    550

BSNT_03718___    551 CTTGTTTTTCATAA    564
                     ||||||||||||||
BSU24890___yq    551 CTTGTTTTTCATAA    564


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