Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03670 and BSU24610

See DNA alignment / Visit BSNT_03670 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence pep-align/BSNT_03670___sinR.1.22522.seq
#    -bsequence pep-align/BSU24610___sinR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03670___sinR-BSU24610___sinR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03670___sinR-BSU24610___sinR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03670___sinR
# 2: BSU24610___sinR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity:     110/113 (97.3%)
# Similarity:   111/113 (98.2%)
# Gaps:           2/113 ( 1.8%)
# Score: 559.0
# 
#
#=======================================

BSNT_03670___      1 MTLIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLE     50
                       :|||||||||||||||||||||||||||||||||||||||||||||||
BSU24610___si      1 --MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLE     48

BSNT_03670___     51 KVSAVLDVSVHTLLDEKHETEYDGQLDSEWEKLVRDAMTSGVSKKQFREF    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24610___si     49 KVSAVLDVSVHTLLDEKHETEYDGQLDSEWEKLVRDAMTSGVSKKQFREF     98

BSNT_03670___    101 LDYQKWRKSQKEE    113
                     |||||||||||||
BSU24610___si     99 LDYQKWRKSQKEE    111


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