Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03670 and BSU24610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:37
# Commandline: needle
# -asequence pep-align/BSNT_03670___sinR.1.22522.seq
# -bsequence pep-align/BSU24610___sinR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03670___sinR-BSU24610___sinR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03670___sinR-BSU24610___sinR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03670___sinR
# 2: BSU24610___sinR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 113
# Identity: 110/113 (97.3%)
# Similarity: 111/113 (98.2%)
# Gaps: 2/113 ( 1.8%)
# Score: 559.0
#
#
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BSNT_03670___ 1 MTLIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLE 50
:|||||||||||||||||||||||||||||||||||||||||||||||
BSU24610___si 1 --MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLE 48
BSNT_03670___ 51 KVSAVLDVSVHTLLDEKHETEYDGQLDSEWEKLVRDAMTSGVSKKQFREF 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU24610___si 49 KVSAVLDVSVHTLLDEKHETEYDGQLDSEWEKLVRDAMTSGVSKKQFREF 98
BSNT_03670___ 101 LDYQKWRKSQKEE 113
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BSU24610___si 99 LDYQKWRKSQKEE 111
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