Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03561 and BSU23930

See DNA alignment / Visit BSNT_03561 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence pep-align/BSNT_03561___yqjC.1.22522.seq
#    -bsequence pep-align/BSU23930___yqjC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03561___yqjC-BSU23930___yqjC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03561___yqjC-BSU23930___yqjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03561___yqjC
# 2: BSU23930___yqjC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 140
# Identity:     136/140 (97.1%)
# Similarity:   137/140 (97.9%)
# Gaps:           0/140 ( 0.0%)
# Score: 695.0
# 
#
#=======================================

BSNT_03561___      1 MNRLDHIGIAVFSIKDARSFYENVLGLAFLHQETVEEQKVNVAFFQAGSV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23930___yq      1 MNRLDHIGIAVFSIKDARSFYENVLGLAFLHQETVEEQKVNVAFFQAGSV     50

BSNT_03561___     51 KLELIEPLTADSPVRLFLEKKGQGLHHIAFLCNGLSEQLQALSDRHVQLI    100
                     ||||||||||||||.||||||||||||||||||.||||||||||:|||||
BSU23930___yq     51 KLELIEPLTADSPVHLFLEKKGQGLHHIAFLCNCLSEQLQALSDQHVQLI    100

BSNT_03561___    101 DRFPRQGANGKKIAFISPRETNGVLVELCEPKGDQQNEHE    140
                     |||||||||||||||||||||||||||||||||||.||||
BSU23930___yq    101 DRFPRQGANGKKIAFISPRETNGVLVELCEPKGDQHNEHE    140


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.