Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03561 and BSU23930

See Amino acid alignment / Visit BSNT_03561 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence dna-align/BSNT_03561___yqjC.1.22522.seq
#    -bsequence dna-align/BSU23930___yqjC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03561___yqjC-BSU23930___yqjC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03561___yqjC-BSU23930___yqjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03561___yqjC
# 2: BSU23930___yqjC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 423
# Identity:     415/423 (98.1%)
# Similarity:   415/423 (98.1%)
# Gaps:           0/423 ( 0.0%)
# Score: 2043.0
# 
#
#=======================================

BSNT_03561___      1 ATGAACAGGCTTGACCATATCGGGATAGCCGTTTTTTCGATAAAAGATGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23930___yq      1 ATGAACAGGCTTGACCATATCGGGATAGCCGTTTTTTCGATAAAAGATGC     50

BSNT_03561___     51 AAGAAGCTTTTATGAAAATGTATTGGGGCTTGCATTTCTTCATCAAGAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23930___yq     51 AAGAAGCTTTTATGAAAATGTATTGGGGCTTGCATTTCTTCATCAAGAAA    100

BSNT_03561___    101 CGGTTGAAGAGCAAAAGGTGAATGTTGCTTTTTTTCAAGCTGGTAGCGTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23930___yq    101 CGGTTGAAGAGCAAAAGGTGAATGTTGCTTTTTTTCAAGCTGGTAGCGTC    150

BSNT_03561___    151 AAACTTGAGCTGATAGAGCCGTTGACAGCTGACAGCCCCGTCCGTTTATT    200
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU23930___yq    151 AAACTTGAGCTGATAGAGCCGTTGACAGCTGACAGCCCCGTCCATTTATT    200

BSNT_03561___    201 TTTGGAGAAGAAAGGGCAGGGACTGCATCATATTGCGTTTTTGTGCAACG    250
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU23930___yq    201 TTTGGAGAAGAAAGGGCAGGGACTGCATCATATTGCGTTTTTGTGCAACT    250

BSNT_03561___    251 GCCTATCTGAACAGCTTCAAGCATTGTCTGACCGGCATGTTCAATTGATT    300
                     |||||||||||||||||||||||||||||||.|.||||||||||||||||
BSU23930___yq    251 GCCTATCTGAACAGCTTCAAGCATTGTCTGATCAGCATGTTCAATTGATT    300

BSNT_03561___    301 GACAGGTTTCCAAGACAGGGGGCGAACGGGAAAAAGATCGCGTTTATTTC    350
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU23930___yq    301 GACAGGTTTCCAAGACAGGGAGCGAACGGGAAAAAGATCGCGTTTATTTC    350

BSNT_03561___    351 CCCTCGGGAAACAAACGGTGTTCTTGTAGAGCTTTGTGAACCGAAAGGAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23930___yq    351 CCCTCGGGAAACAAACGGTGTTCTTGTAGAGCTTTGTGAACCGAAAGGAG    400

BSNT_03561___    401 ATCAACAGAATGAACATGAATGA    423
                     |.|||||.|||||.|||||||||
BSU23930___yq    401 ACCAACACAATGAGCATGAATGA    423


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