Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03555 and BSU23900

See DNA alignment / Visit BSNT_03555 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:25
# Commandline: needle
#    -asequence pep-align/BSNT_03555___yqjF.1.22522.seq
#    -bsequence pep-align/BSU23900___yqjF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03555___yqjF-BSU23900___yqjF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03555___yqjF-BSU23900___yqjF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03555___yqjF
# 2: BSU23900___yqjF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 242
# Identity:     232/242 (95.9%)
# Similarity:   237/242 (97.9%)
# Gaps:           0/242 ( 0.0%)
# Score: 1266.0
# 
#
#=======================================

BSNT_03555___      1 MTEHFQQKNISIPEGIWIMRQTWNDVLFAHWPVDVSILRALVPSVLELDT     50
                     |||.|||||||:|:||||||||||||||||||||||||||||||||||||
BSU23900___yq      1 MTERFQQKNISVPDGIWIMRQTWNDVLFAHWPVDVSILRALVPSVLELDT     50

BSNT_03555___     51 YNGQAWISMLPFMLTNLRARYLPAIPGARAFPELNLRTYVTYKGKPGIYF    100
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU23900___yq     51 YNGQAWISMLPFMLTNLRARYLPVIPGARAFPELNLRTYVTYKGKPGIYF    100

BSNT_03555___    101 FSLDADHRLAALGARTFFHLPYFYADMKAEKNGDGIDYVSKRKDDKEAAF    150
                     ||||||||||.|||||||||||||||||:|||||.||||||||:||||||
BSU23900___yq    101 FSLDADHRLAVLGARTFFHLPYFYADMKSEKNGDAIDYVSKRKNDKEAAF    150

BSNT_03555___    151 HAAYRPISAPFTAEKDSLDYWLTERYRLYTTNQNKLYYEDIHHHPWLLQN    200
                     |||||||||||||||||||||||||||||||.:|||||||||||||||||
BSU23900___yq    151 HAAYRPISAPFTAEKDSLDYWLTERYRLYTTYRNKLYYEDIHHHPWLLQN    200

BSNT_03555___    201 AEAEISVNTVTDAHGITLPESDPLLHYAKKQDVLFWPLRKWS    242
                     ||||||||||||||||||||||||||||||||||||||||||
BSU23900___yq    201 AEAEISVNTVTDAHGITLPESDPLLHYAKKQDVLFWPLRKWS    242


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