Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03555 and BSU23900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence dna-align/BSNT_03555___yqjF.1.22522.seq
# -bsequence dna-align/BSU23900___yqjF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03555___yqjF-BSU23900___yqjF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03555___yqjF-BSU23900___yqjF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03555___yqjF
# 2: BSU23900___yqjF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 729
# Identity: 694/729 (95.2%)
# Similarity: 694/729 (95.2%)
# Gaps: 0/729 ( 0.0%)
# Score: 3330.0
#
#
#=======================================
BSNT_03555___ 1 TTGACGGAACACTTTCAGCAAAAAAACATTTCTATACCTGAAGGAATCTG 50
||||||||||.|||||||||||||||.||||||.|||||||.||||||||
BSU23900___yq 1 TTGACGGAACGCTTTCAGCAAAAAAATATTTCTGTACCTGATGGAATCTG 50
BSNT_03555___ 51 GATCATGAGACAAACCTGGAATGATGTCTTATTTGCTCACTGGCCTGTTG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23900___yq 51 GATCATGAGACAAACCTGGAATGATGTCTTATTTGCTCACTGGCCTGTTG 100
BSNT_03555___ 101 ATGTTTCTATCCTTCGCGCTTTGGTACCGTCTGTTTTAGAATTAGATACA 150
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU23900___yq 101 ATGTTTCTATCCTTCGCGCTTTGGTACCGTCCGTTTTAGAATTAGATACA 150
BSNT_03555___ 151 TATAACGGGCAAGCTTGGATCAGTATGCTTCCCTTTATGCTCACGAACCT 200
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU23900___yq 151 TATAACGGGCAAGCTTGGATCAGCATGCTTCCCTTTATGCTCACGAACCT 200
BSNT_03555___ 201 GAGGGCGCGTTATCTTCCTGCCATTCCCGGTGCGCGTGCATTTCCTGAGC 250
|||||||||||||||.||||.|||||||||||||||||||||||||||||
BSU23900___yq 201 GAGGGCGCGTTATCTCCCTGTCATTCCCGGTGCGCGTGCATTTCCTGAGC 250
BSNT_03555___ 251 TTAACCTCCGCACCTATGTCACGTATAAAGGCAAGCCCGGCATTTATTTT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23900___yq 251 TTAACCTCCGCACCTATGTCACGTATAAAGGCAAGCCCGGCATTTATTTT 300
BSNT_03555___ 301 TTTAGCTTAGATGCCGATCATCGGCTGGCCGCCCTTGGCGCTCGCACATT 350
|||||||||||||||||||||||.|||||.|.||||||||||||||||||
BSU23900___yq 301 TTTAGCTTAGATGCCGATCATCGTCTGGCGGTCCTTGGCGCTCGCACATT 350
BSNT_03555___ 351 CTTTCATCTGCCTTATTTTTACGCGGATATGAAAGCCGAAAAAAACGGTG 400
|||||||||||||||||||||||||||||||||..|||||||||||||||
BSU23900___yq 351 CTTTCATCTGCCTTATTTTTACGCGGATATGAAGTCCGAAAAAAACGGTG 400
BSNT_03555___ 401 ATGGCATTGACTATGTCAGCAAACGGAAAGATGACAAAGAAGCAGCATTC 450
|||.||||||||||||||||||.||||||.||||||||||||||||||||
BSU23900___yq 401 ATGCCATTGACTATGTCAGCAAGCGGAAAAATGACAAAGAAGCAGCATTC 450
BSNT_03555___ 451 CACGCCGCATACCGGCCCATTTCAGCTCCTTTTACAGCAGAAAAGGATTC 500
|||||||||||||||||.||||||||.|||||||||||||||||||||||
BSU23900___yq 451 CACGCCGCATACCGGCCAATTTCAGCGCCTTTTACAGCAGAAAAGGATTC 500
BSNT_03555___ 501 GCTCGATTACTGGCTGACAGAACGGTATAGACTCTATACTACCAATCAAA 550
||||||||||||||||||||||||.||.||.|||||.||.||..|||..|
BSU23900___yq 501 GCTCGATTACTGGCTGACAGAACGATACAGGCTCTACACCACTTATCGCA 550
BSNT_03555___ 551 ACAAACTCTATTACGAAGACATCCATCATCATCCATGGCTGCTGCAAAAC 600
|.||.|||||||||||||||||||||||||||||.|||||||||||||||
BSU23900___yq 551 ATAAGCTCTATTACGAAGACATCCATCATCATCCGTGGCTGCTGCAAAAC 600
BSNT_03555___ 601 GCTGAAGCGGAAATTTCAGTCAATACGGTGACTGATGCTCACGGCATTAC 650
||.|||||.|||||||||||||||||||||||||||||||||||.|||||
BSU23900___yq 601 GCCGAAGCAGAAATTTCAGTCAATACGGTGACTGATGCTCACGGTATTAC 650
BSNT_03555___ 651 ATTGCCAGAGTCAGACCCCTTGCTTCATTACGCTAAAAAACAGGATGTGT 700
||||||.|||||||||||||||||||||||.|||||||||||||||||||
BSU23900___yq 651 ATTGCCGGAGTCAGACCCCTTGCTTCATTATGCTAAAAAACAGGATGTGT 700
BSNT_03555___ 701 TATTTTGGCCGCTTAGGAAATGGAGCTAA 729
|||||||||||||||||||||||||||||
BSU23900___yq 701 TATTTTGGCCGCTTAGGAAATGGAGCTAA 729
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