Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03517 and BSU23640

See DNA alignment / Visit BSNT_03517 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence pep-align/BSNT_03517___yqkD.1.22522.seq
#    -bsequence pep-align/BSU23640___yqkD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03517___yqkD-BSU23640___yqkD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03517___yqkD-BSU23640___yqkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03517___yqkD
# 2: BSU23640___yqkD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     299/305 (98.0%)
# Similarity:   302/305 (99.0%)
# Gaps:           0/305 ( 0.0%)
# Score: 1578.0
# 
#
#=======================================

BSNT_03517___      1 MKKILLAIGALVTAVIAIGIVFSNMILFIKKKTDEDIIKRETDNGHDVFE     50
                     |||||||||||||||||||||||:||||||||||||||||||||||||||
BSU23640___yq      1 MKKILLAIGALVTAVIAIGIVFSHMILFIKKKTDEDIIKRETDNGHDVFE     50

BSNT_03517___     51 SFEQMEKTAFVIPSAYGYDIKGYHVAPHDTPNTIIICHGVTMNVLNSLKY    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23640___yq     51 SFEQMEKTAFVIPSAYGYDIKGYHVAPHDTPNTIIICHGVTMNVLNSLKY    100

BSNT_03517___    101 MHLFLDLGWNVLIYDHRRHGQSGGKTTSYGFYEKDDLNKVVSWLKNKTNH    150
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU23640___yq    101 MHLFLDLGWNVLIYDHRRHGQSGGKTTSYGFYEKDDLNKVVSLLKNKTNH    150

BSNT_03517___    151 CGLIGIHGESMGAVTALLYAGAHCSDGADFYIADCPFACFDEQLAYRLRA    200
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU23640___yq    151 RGLIGIHGESMGAVTALLYAGAHCSDGADFYIADCPFACFDEQLAYRLRA    200

BSNT_03517___    201 DYRLPSWPLLPIADFFLKLRGGYRAREVSPLAVIDKIEKPILFIHSKDDD    250
                     :|||||||||||||||||||||||||||||||||||||||:|||||||||
BSU23640___yq    201 EYRLPSWPLLPIADFFLKLRGGYRAREVSPLAVIDKIEKPVLFIHSKDDD    250

BSNT_03517___    251 YIPVSSTERLYEKKRGPKALYIAENGEHAMSYTKNRDTYRKTVQEFLDNM    300
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU23640___yq    251 YIPVSSTERLYEKKRGPKALYIAENGEHAMSYTKNRHTYRKTVQEFLDNM    300

BSNT_03517___    301 NDSTE    305
                     |||||
BSU23640___yq    301 NDSTE    305


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