Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03517 and BSU23640

See Amino acid alignment / Visit BSNT_03517 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence dna-align/BSNT_03517___yqkD.1.22522.seq
#    -bsequence dna-align/BSU23640___yqkD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03517___yqkD-BSU23640___yqkD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03517___yqkD-BSU23640___yqkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03517___yqkD
# 2: BSU23640___yqkD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 918
# Identity:     893/918 (97.3%)
# Similarity:   893/918 (97.3%)
# Gaps:           0/918 ( 0.0%)
# Score: 4365.0
# 
#
#=======================================

BSNT_03517___      1 TTGAAGAAAATCCTTTTGGCCATTGGCGCTCTCGTAACAGCTGTCATCGC     50
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU23640___yq      1 TTGAAGAAAATCCTTTTGGCCATTGGCGCGCTCGTAACAGCTGTCATCGC     50

BSNT_03517___     51 AATCGGAATTGTTTTTTCAAATATGATTCTATTCATCAAGAAAAAAACGG    100
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU23640___yq     51 AATCGGAATTGTTTTTTCACATATGATTCTATTCATCAAGAAAAAAACGG    100

BSNT_03517___    101 ATGAAGACATTATCAAAAGAGAGACAGACAACGGACATGATGTGTTTGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23640___yq    101 ATGAAGACATTATCAAAAGAGAGACAGACAACGGACATGATGTGTTTGAA    150

BSNT_03517___    151 TCATTTGAGCAAATGGAGAAAACCGCTTTTGTGATACCCTCCGCTTACGG    200
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU23640___yq    151 TCATTTGAACAAATGGAGAAAACCGCTTTTGTGATACCCTCCGCTTACGG    200

BSNT_03517___    201 GTATGACATAAAAGGATACCATGTCGCACCGCATGACACACCAAACACTA    250
                     |||.|||||||||||||||||||||||||||||||||||||||||.||.|
BSU23640___yq    201 GTACGACATAAAAGGATACCATGTCGCACCGCATGACACACCAAATACCA    250

BSNT_03517___    251 TCATCATCTGCCACGGGGTGACGATGAATGTGCTGAATTCTCTTAAGTAT    300
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU23640___yq    251 TCATCATCTGCCACGGGGTGACGATGAATGTACTGAATTCTCTTAAGTAT    300

BSNT_03517___    301 ATGCATTTATTTCTTGATCTCGGCTGGAATGTGCTCATTTATGACCACCG    350
                     ||||||||||||||.||||||||||||||||||||||||||||||||.||
BSU23640___yq    301 ATGCATTTATTTCTAGATCTCGGCTGGAATGTGCTCATTTATGACCATCG    350

BSNT_03517___    351 CCGGCATGGCCAAAGCGGCGGAAAGACGACCAGCTACGGATTTTACGAAA    400
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU23640___yq    351 CCGGCATGGCCAAAGCGGCGGAAAGACGACCAGCTACGGGTTTTACGAAA    400

BSNT_03517___    401 AGGATGATCTCAATAAGGTTGTCAGCTGGCTCAAAAACAAAACAAATCAT    450
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU23640___yq    401 AGGATGATCTCAATAAGGTTGTCAGCTTGCTCAAAAACAAAACAAATCAT    450

BSNT_03517___    451 TGCGGATTGATCGGAATTCACGGTGAGTCGATGGGAGCTGTGACCGCCCT    500
                     .|||||||||||||||||||.||||||||||||||.||.|||||||||||
BSU23640___yq    451 CGCGGATTGATCGGAATTCATGGTGAGTCGATGGGGGCCGTGACCGCCCT    500

BSNT_03517___    501 GCTTTACGCTGGTGCACACTGCAGCGATGGCGCTGATTTTTATATTGCCG    550
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU23640___yq    501 GCTTTATGCTGGTGCACACTGCAGCGATGGCGCTGATTTTTATATTGCCG    550

BSNT_03517___    551 ATTGTCCGTTCGCATGTTTTGATGAGCAGCTTGCCTACCGGCTGAGAGCG    600
                     |||||||||||||||||||||||||.|||||||||||.||||||||||||
BSU23640___yq    551 ATTGTCCGTTCGCATGTTTTGATGAACAGCTTGCCTATCGGCTGAGAGCG    600

BSNT_03517___    601 GATTACAGGCTCCCGTCTTGGCCCCTGCTCCCTATCGCCGACTTCTTTTT    650
                     ||.||||||||||||||||||||||||||.||||||||||||||||||||
BSU23640___yq    601 GAATACAGGCTCCCGTCTTGGCCCCTGCTTCCTATCGCCGACTTCTTTTT    650

BSNT_03517___    651 GAAGCTGAGGGGCGGCTATCGCGCACGTGAAGTATCTCCGCTTGCTGTCA    700
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU23640___yq    651 GAAGCTGAGGGGAGGCTATCGCGCACGTGAAGTATCTCCGCTTGCTGTCA    700

BSNT_03517___    701 TTGATAAAATCGAAAAGCCGATCCTCTTTATTCACAGTAAGGATGATGAC    750
                     ||||||||||.|||||||||.|||||||||||||||||||||||||||||
BSU23640___yq    701 TTGATAAAATTGAAAAGCCGGTCCTCTTTATTCACAGTAAGGATGATGAC    750

BSNT_03517___    751 TACATTCCTGTTTCTTCAACCGAGCGGCTTTATGAAAAGAAACGCGGGCC    800
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU23640___yq    751 TACATTCCTGTTTCTTCAACCGAGCGGCTTTATGAAAAGAAACGCGGTCC    800

BSNT_03517___    801 GAAAGCGCTGTACATTGCCGAGAACGGTGAACACGCCATGTCATATACCA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23640___yq    801 GAAAGCGCTGTACATTGCCGAGAACGGTGAACACGCCATGTCATATACCA    850

BSNT_03517___    851 AAAATCGGGATACGTACCGAAAAACAGTGCAGGAGTTTTTAGACAACATG    900
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU23640___yq    851 AAAATCGGCATACGTACCGAAAAACAGTGCAGGAGTTTTTAGACAACATG    900

BSNT_03517___    901 AATGATTCAACAGAATAA    918
                     ||||||||||||||||||
BSU23640___yq    901 AATGATTCAACAGAATAA    918


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