Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03425 and BSU23010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence pep-align/BSNT_03425___ypbD.1.22522.seq
# -bsequence pep-align/BSU23010___ypbD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03425___ypbD-BSU23010___ypbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03425___ypbD-BSU23010___ypbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03425___ypbD
# 2: BSU23010___ypbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 187/200 (93.5%)
# Similarity: 188/200 (94.0%)
# Gaps: 11/200 ( 5.5%)
# Score: 971.0
#
#
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BSNT_03425___ 1 MTDRDMLKQLYLTQLLIIFAAAAAGLFFFEDVRDVLKLWDIRDMRIIWYG 50
:||||||||||||||||||||||||||||||||||||||
BSU23010___yp 1 -----------MTQLLIIFAAAAAGLFFFEDVRDVLKLWDIRDMRIIWYG 39
BSNT_03425___ 51 VSIAVIVILADMAVMKWFPSHLYDDGGINKKIFSKRSIPHIIFLTLLIAF 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp 40 VSIAVIVILADMAVMKWFPSHLYDDGGINKKIFSKRSIPHIIFLTLLIAF 89
BSNT_03425___ 101 AEEMLFRGVLQTHIGLWAASLIFAALHFRYLSKWLLFIMVTAISFLLGLM 150
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU23010___yp 90 AEEMLFRGVLQTHIGLWTASLIFAALHFRYLSKWLLFIMVTAISFLLGLM 139
BSNT_03425___ 151 YEWTGNLFVPMTAHFIIDAVFACQIRFEHVRRDKHDEHVESREKKSPESL 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp 140 YEWTGNLFVPMTAHFIIDAVFACQIRFEHVRRDKHDEHVESREKKSPESL 189
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