Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03425 and BSU23010

See Amino acid alignment / Visit BSNT_03425 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:10
# Commandline: needle
#    -asequence dna-align/BSNT_03425___ypbD.1.22522.seq
#    -bsequence dna-align/BSU23010___ypbD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03425___ypbD-BSU23010___ypbD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03425___ypbD-BSU23010___ypbD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03425___ypbD
# 2: BSU23010___ypbD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 603
# Identity:     569/603 (94.4%)
# Similarity:   569/603 (94.4%)
# Gaps:          33/603 ( 5.5%)
# Score: 2841.0
# 
#
#=======================================

BSNT_03425___      1 ATGACTGACCGTGATATGCTGAAGCAGTTATATTTGACGCAGCTACTCAT     50
                                                      |||||||||||||||||
BSU23010___yp      1 ---------------------------------TTGACGCAGCTACTCAT     17

BSNT_03425___     51 CATCTTTGCCGCTGCTGCAGCAGGACTGTTCTTTTTTGAGGATGTACGGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp     18 CATCTTTGCCGCTGCTGCAGCAGGACTGTTCTTTTTTGAGGATGTACGGG     67

BSNT_03425___    101 ACGTATTAAAGCTCTGGGACATTCGCGATATGCGAATCATCTGGTATGGT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp     68 ACGTATTAAAGCTCTGGGACATTCGCGATATGCGAATCATCTGGTATGGT    117

BSNT_03425___    151 GTTTCTATAGCTGTTATTGTTATTTTAGCCGATATGGCAGTAATGAAATG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp    118 GTTTCTATAGCTGTTATTGTTATTTTAGCCGATATGGCAGTAATGAAATG    167

BSNT_03425___    201 GTTTCCGTCTCATTTATATGATGACGGCGGAATCAATAAAAAAATATTCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp    168 GTTTCCGTCTCATTTATATGATGACGGCGGAATCAATAAAAAAATATTCA    217

BSNT_03425___    251 GTAAGAGGTCAATCCCTCATATTATATTTTTAACGCTTCTGATTGCTTTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp    218 GTAAGAGGTCAATCCCTCATATTATATTTTTAACGCTTCTGATTGCTTTC    267

BSNT_03425___    301 GCGGAAGAAATGTTATTCAGAGGAGTGCTGCAGACTCATATCGGTTTATG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp    268 GCGGAAGAAATGTTATTCAGAGGAGTGCTGCAGACTCATATCGGTTTATG    317

BSNT_03425___    351 GGCGGCCAGCCTTATATTTGCCGCTCTGCACTTTCGGTATTTGTCAAAAT    400
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp    318 GACGGCCAGCCTTATATTTGCCGCTCTGCACTTTCGGTATTTGTCAAAAT    367

BSNT_03425___    401 GGCTGTTATTTATTATGGTGACAGCAATCAGCTTTTTGCTCGGTCTGATG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp    368 GGCTGTTATTTATTATGGTGACAGCAATCAGCTTTTTGCTCGGTCTGATG    417

BSNT_03425___    451 TATGAATGGACCGGCAACTTATTTGTTCCGATGACGGCGCATTTTATCAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp    418 TATGAATGGACCGGCAACTTATTTGTTCCGATGACGGCGCATTTTATCAT    467

BSNT_03425___    501 TGATGCCGTGTTTGCCTGTCAGATTCGTTTTGAACATGTGAGGAGGGATA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp    468 TGATGCCGTGTTTGCCTGTCAGATTCGTTTTGAACATGTGAGGAGGGATA    517

BSNT_03425___    551 AACATGACGAACATGTCGAGAGTAGAGAGAAGAAAAGCCCAGAATCTTTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23010___yp    518 AACATGACGAACATGTCGAGAGTAGAGAGAAGAAAAGCCCAGAATCTTTA    567

BSNT_03425___    601 TGA    603
                     |||
BSU23010___yp    568 TGA    570


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